Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03574 ATGGAGACCATGGGAACTTTGGAGAGAGACCTAAAGAAAATGAGAGACTATTTTGAGAGTGGAAAGACAAAGGAAGAGTCTTGGAGAGAATCACAGCTCAAAGGGTTGTATCGTTTCCTTATGGAAAAACAAGAAGACATCATGAAGGCCCTCATGCAAGATTTAGGGAAACACCAAATTGAATCTTTTAGAGATGAGGTAGGAACGCTGATGAAGACCTTAAATTTAGCATTAAAGTGTTTGAAAGAGTGGATGTCTGGCAAAAAGGCTAAATTGCCACAAATAGCATTGCTTACAAGTGCAGAAATTGTTCCTGAGCCTCTGGGTCTTGTCCTCATTATTTCATCTTGGAATTTCCCCTTTGGAATTTCCTTGGAGCCACTGATAGGAGCAGTAGCAGCAGGAAACGCTGTAGTGTTAAAGCCTTCAGAGTTGTCTCCTGCAAGTTCTTCTCTACTTGCTTCTACTCTTCCCACTTACTTGGACAATGAAGCTATTAAGATTATAGAAGGTGGACCAGAGGAGTCAGAGCAACTACTACAACAAAGATGGGACAAAATCTTCTTTACAGGAAGTGCACGTGTGGGGCGAATTGTGATGTCTGCAGCAGTGAAGCATTTGACTCCTGTCACTCTGGAATTGGGTGGAAAATGCCCTGCTGTTGTTGACTCTCTTTCATCTTCTTGGGATATAGAGGTGGCTGTGAAGCGGATTATTGTGGGGAAATATGGGACTTGTGCTGGTCAAGCATGCATAGCAATTGACTATGTCCTTGTGGAATCTGGATACTGTTCAAAACTGGTGGAATTGATTAAGGTGTGGATCAAGAAAATGTTTGGAGACAAGCCACAACATTCCAAGACTATTGCTAGGATAGTTAATAAACAACACTTCTCTAGATTGAAGAATCTTCTTACTGATGAAAAGGTCAAAAAATCTGTGGTTTATGGTGGCTCAATGGACGAAGAAAACTTATTTATTGAGCCAACAATCTTGGTGGATCCCCCACTTGATGCAGCAATCATGTCAGAAGAAATTTTTGGCCCATTGCTTCCGATTATTACTGTGGAGAAGATTGAGGACAGCATTAAATTCATAAGTTCTAGGCCTAAGCCACTTGCTCTTTATGTTTTCACCAAAAACCAAACACTGCAGAAAAGAATGATATCTGAGACATCATCTGGCAGTGTGACTTTCAATGATGCGATTCTACAATATGCAGCGGATTCTCTCCCATTTGGAGGAGTGGGTCAAAGTGGGTTTGGCATGTACCATGGAAAGTTCTCTTTTGACACATTCAGCCACCAAAAGGCAATTGTGAGGAGGAGTTACCTCACTGATTTTTGGTATAGGTATCCTCCATGGACACTAAATAAGTTACAACTACTTGAGGTCTCTTACAATTATGATTATCTGGGATTGCTCCTTGTCATTCTGGGCTTGAAGAGACCATCAAAACGCAAGATCATAGTTTGCTAA 1479 0.4118 METMGTLERDLKKMRDYFESGKTKEESWRESQLKGLYRFLMEKQEDIMKALMQDLGKHQIESFRDEVGTLMKTLNLALKCLKEWMSGKKAKLPQIALLTSAEIVPEPLGLVLIISSWNFPFGISLEPLIGAVAAGNAVVLKPSELSPASSSLLASTLPTYLDNEAIKIIEGGPEESEQLLQQRWDKIFFTGSARVGRIVMSAAVKHLTPVTLELGGKCPAVVDSLSSSWDIEVAVKRIIVGKYGTCAGQACIAIDYVLVESGYCSKLVELIKVWIKKMFGDKPQHSKTIARIVNKQHFSRLKNLLTDEKVKKSVVYGGSMDEENLFIEPTILVDPPLDAAIMSEEIFGPLLPIITVEKIEDSIKFISSRPKPLALYVFTKNQTLQKRMISETSSGSVTFNDAILQYAADSLPFGGVGQSGFGMYHGKFSFDTFSHQKAIVRRSYLTDFWYRYPPWTLNKLQLLEVSYNYDYLGLLLVILGLKRPSKRKIIVC. 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03574 492 Pfam Aldehyde dehydrogenase family 11 439 IPR015590 GO:0016491
Seca3g03574 492 PIRSF ALDH 1 475 IPR012394 GO:0006081
Seca3g03574 492 FunFam Aldehyde dehydrogenase 216 419 - -
Seca3g03574 492 SUPERFAMILY ALDH-like 10 456 IPR016161 GO:0016491
Seca3g03574 492 PANTHER ALDEHYDE DEHYDROGENASE 4 474 IPR012394 GO:0006081
Seca3g03574 492 Coils Coil 41 61 - -
Seca3g03574 492 FunFam Aldehyde dehydrogenase 15 219 - -
Seca3g03574 492 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 15 437 IPR016162 GO:0016491
Seca3g03574 492 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 216 419 IPR016163 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03574 Seca-Chr3 64619177 64623240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03574 1 483 Aldehyde Dehydrogenase Gene Family AT4G36250 53.926 0.0 577