Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03566 ATGGCTTCCATAGCACTCACCACCGCCACCCTCCCATCTCTCCGCCTCCGCTCTTCCCCTAAATCTTCACCACTTCGCCATTCCACCACTTTCAAACCCCTCAAACTCAACCGCAACCCTTCCATTTCTTCCTTCCCTTCCTTCCCACTTTCCACACTCATCTCAAATCGGAAATCTCCCACTCTCACTGTTAGAGCCTCGGCAGCTTCAGCTTCACCCCCAGCCCCTATTACTCCGGCTCCGGTTCAGCCATGGCAGGGCGCAGCCATAAAACCCCTTATAGCTTCCATAGCGATTGGGGTTCTACTCTGGTTCGCTCCCGTTCCCGAGGGTGTCTCCCGAAATGCATGGCAATTGCTCGCGATTTTCTTGGGCACAATCGTCGGCATTATCACCCAGCCATTGCCCCTCGGTGCCGTCGCTATATTGGGATTGGGAGTGTCTGTTCTCACGAAAACCCTAACTTTCGCGGCAGCCTTTTCAGGCTTCGGGGATCCCATTCCCTGGCTCATTTGCCTCGCCTTCTTCTTCGCTAAGGGTTTCATCAAAACCGGCCTCGGAAATCGCGTCGCTTACCAATTCGTGTCCCTTTTCGGTAGCTCTTCGTTAGGGTTAGGTTATAGCTTGGTTTTCAGCGAGGCCTTGTTGGCACCGGCAATTCCTTCGGTTTCCGCCAGAGCCGGTGGGATTTTTCTTCCGTTGGTTAAGTCTCTGTGTGTAGCTTGTGGTAGTAACGCTGGCGATGGAACGGAGAACAGGCTGGGGTCGTGGTTGATGCTGACTTGCTTTCAGACTTCCGTGATTTCGTCGGCGATGTTTCTGACTGCAATGGCGGCGAATCCATTGTGCGCCACTCTCACTCTGAATTCCATTAACCAGACACTTGGGTGGTTGGACTGGGCCAAAGCTGCGATCGTACCCGGGTTGGCATCGTTGGTGTTGGTGCCCTTGATCTTGTATGTCATCTACCCTCCTACCCTGAAATCCAGTCCAGACGCACCTAAGCTTGCTAGGGAGAAGTTGGAGAAGATGGGGCCCATGTCAACCAACGAAAAGATCATGACTGTCACTCTGCTTCTTACGGTGGGACTTTGGGTTTTTGGTGGGGCTCTCAAGATAGATGCTGTAAGTGCTGCCATTCTTGGATTAGCAGTACTCCTTGTCACAGGGGTTGTAACATGGAAGGAGTGCTTAGCTGAAGGAGTTGCCTGGGATACTCTCACATGGTTTGCTGCCCTCATTGCAATGGCTGGGTATTTGAACAAATATGGTCTCATTTCTTGGTTCAGTCAAACCGTAGTCAAGTTTGTTGGTGGATTGGGTCTCTCATGGCAACTATCCTTTGGAATTCTGGTCCTTCTCTACTTCTACTCTCATTACTTCTTTGCAAGTGGAGCTGCACATATTGGTGCCATGTTTACTGCATTTTTGTCTGTTGCTACTGCTCTGGGGACTCCACCATACTTTGGAGCCATGGTGCTGTCCTTCCTCTCCAACCTTATGGGAGGCCTTACTCATTATGGAATTGGTTCAGCTCCAGTATTTTTCGGTGCCAACTATGTTCCCCTTGCTAAATGGTGGGGCTACGGATTCCTTATTAGTATCGTTAACATTATAATCTGGCTTGGACTTGGAGGAGTTTGGTGGAAAGCCATTGGCTTGTGGTAA 1668 0.5072 MASIALTTATLPSLRLRSSPKSSPLRHSTTFKPLKLNRNPSISSFPSFPLSTLISNRKSPTLTVRASAASASPPAPITPAPVQPWQGAAIKPLIASIAIGVLLWFAPVPEGVSRNAWQLLAIFLGTIVGIITQPLPLGAVAILGLGVSVLTKTLTFAAAFSGFGDPIPWLICLAFFFAKGFIKTGLGNRVAYQFVSLFGSSSLGLGYSLVFSEALLAPAIPSVSARAGGIFLPLVKSLCVACGSNAGDGTENRLGSWLMLTCFQTSVISSAMFLTAMAANPLCATLTLNSINQTLGWLDWAKAAIVPGLASLVLVPLILYVIYPPTLKSSPDAPKLAREKLEKMGPMSTNEKIMTVTLLLTVGLWVFGGALKIDAVSAAILGLAVLLVTGVVTWKECLAEGVAWDTLTWFAALIAMAGYLNKYGLISWFSQTVVKFVGGLGLSWQLSFGILVLLYFYSHYFFASGAAHIGAMFTAFLSVATALGTPPYFGAMVLSFLSNLMGGLTHYGIGSAPVFFGANYVPLAKWWGYGFLISIVNIIIWLGLGGVWWKAIGLW. 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03566 555 NCBIfam DASS family sodium-coupled anion symporter 107 549 IPR001898 GO:0016020|GO:0022857|GO:0055085
Seca3g03566 555 PANTHER DICARBOXYLATE TRANSPORTER 2.1, CHLOROPLASTIC 62 555 IPR030676 -
Seca3g03566 555 Pfam Sodium:sulfate symporter transmembrane region 92 555 IPR001898 GO:0016020|GO:0022857|GO:0055085
Seca3g03566 555 CDD ArsB_NhaD_permease 127 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03566 Seca-Chr3 64380746 64385424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03566 1 554 Antiporters AT5G12860 78.966 0.0 845
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03566 - - gmx:100796365 902.508