Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03558 ATGGATGGACACATGCCCGGCATGGATGGGATGGGCATGGCACCACCAAAGCCATCTACTAATGGCACCATGATGATGGGCCATAAAATGCACGGCATGATGCACATGACCTTCTTCTGGGGGAAGGATGCCTTGATTCTGTTCGACAATTGGCCTGCGGGTAAAGGTAACATGTATGCTTTGGCCTTGGTCTTTGTGTTTGTGATGTCTGTTCTCATCGAGCTGCTCTCTCACTCCCGGTTCATCAAACCCGGTTCGAACCATGTCACGGCCGGTCTGGTTCAGACCCTGTTGCATCTCCTTAGGGTTGGGCTTTCTTACTTGGTCATGCTGGCACTCATGTCTTTCAATGGGGGAGTTTTCTTGGTTGCTGTGTTCGGTCATGCGCTTGGGTTCTTCTTTTGTAGCAGGGCTTTCAATAAACCGCACAAGGATGAGGGTTTTGATCTTCCTCCAATGTCTTGTTAA 468 0.4979 MDGHMPGMDGMGMAPPKPSTNGTMMMGHKMHGMMHMTFFWGKDALILFDNWPAGKGNMYALALVFVFVMSVLIELLSHSRFIKPGSNHVTAGLVQTLLHLLRVGLSYLVMLALMSFNGGVFLVAVFGHALGFFFCSRAFNKPHKDEGFDLPPMSC. 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03558 155 Pfam Ctr copper transporter family 84 135 IPR007274 GO:0005375|GO:0016020|GO:0035434
Seca3g03558 155 Pfam Ctr copper transporter family 36 80 IPR007274 GO:0005375|GO:0016020|GO:0035434
Seca3g03558 155 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 25 144 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03558 Seca-Chr3 64195612 64196079 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03558 37 155 Inorganic Solute Cotransporters AT5G59030 50.000 1.72e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03558 K14686 - gmx:100306175 227.639