Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03544 ATGTGTCAGTTAACAAGTGAAGACATACAGGGGCTTGAATTTGGTTCTGAGGAAGAAGCATATGAGTTTTATTCCAACTATGCTCGGTGCCATGGTTTTGCTGTAAGAAAAGATGATGTAGGTTATATTGGCAGAGGGTCTGGCAAATTTAAAGTTATGCGTCAATTTGTTTGTAATAGAGAGGGGTTAAGGAATAAAAAACATTTGGGGAGGGTGGATCGAAAAAGAGAGTCTAAGGCATTAACGCGAAGTAATTGTCTTGCTAAGCTTCGTGTTCATTTAGACTTGAGGTCTCGGAAGTGGGTAGTGATTAGCTTTGAGTAA 324 0.3951 MCQLTSEDIQGLEFGSEEEAYEFYSNYARCHGFAVRKDDVGYIGRGSGKFKVMRQFVCNREGLRNKKHLGRVDRKRESKALTRSNCLAKLRVHLDLRSRKWVVISFE. 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03544 107 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 6 107 - -
Seca3g03544 107 Pfam FAR1 DNA-binding domain 22 107 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03544 Seca-Chr3 63742781 63743104 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g03544 FAR1 7.2e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03544 - - ccaj:109792835 128.642