Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03523 ATGGATCCAGAAAGATCAATAGAGGACCAGTTCTCCAAACTACATCCTTCCTTGCCAGTAAACACCAGAATTGGGATAGTTGGTGCTGGTCCAAGTGGCTTATCAGCTGCTTATGCACTAGCCAGGCTTGGTTATGAGAATGTCACAGTATTGGAGAAACATCATACTGTTGGTGGCATGTGTGAATCAGTGGAAATTGAAGGAAAAGTTTATGATCTTGGGGGACAAGTTCTTGCTGCAAGCAGTGCTCCAATTATCTTTCACTTGGCAAAAGAGACAGGTTCTGTACTAGAAGAAATGGACTCTCACAAGCTTGCTGTTATTGACCCTTCCTCTGGAGAATATCAAGATATTAAAGTTGCTGATGATTATGTATCTGTTATGTCACTTACATTGGAAATCCAAGAAAAGGTGAAGAACTGTGGTCGTATTGGGGTTCATGCTGTGAGTGACATTGCTGCAGACTTAACTCCAGAGTATCTTGAGTGTCATGGACTCAAATCCATTCCTAAATCAGTAGCTTATGGTTACACTGCTTCAGGATATGGGTTTGTTCAAGACATGCTTTATGCCTACCTTCATGAATTTACTAGAACGTCCATGGCAGGAAAAATTAGACGGTTTAAAGGTGGATATATGAGCCTTTGGCAAAAGATTGCTGAATCACTTCCTTTAAAACTTCGCTGTAACACTGAAGTATTGGCAATCAGGAGGAACTCTGATGGTGTCACTGTTGATGTCAAGAGCTTAAATGAAGTTGAAAATTTGGAATTTGATAAGATCATAATCTCTGGTTCATTTCCATTAAAATATGGAAGAATTTACAGATCATTGCCTTCAACTTGCATAGAGTGTGAAAGGGAAGTAATGGATGTAAGTGAACTTGAAAAGGATTTGTTCAGCAAAGTGGAGACAAATGACTACTACACCACTGTTTTAAAGATTAAAGGGCTAGAACATTTGCCTGTTGGATTTTATTATATTAGTGAATATATGGAAGATCCCAGCACAATTGGAAATCCAGTTGCAATGCAGAAATATTATGCTGACACTAATATATTCTTGTTCTGGTCCTATGGAAACTCTGTTGATATTAAGGGTCCAACTGTCAAGGAGCTTGCGATCAAGGCAATAGAAGCCATGGGGGGTGAAGTTGAAAATGTCATTCTTCAACGCTGCTTTAAGTATTTTCCTCATGTTGGCAGCCAAGATATGAAAGATGGTTTTTATGAAAAATTGGAATCAGAGCTTCAAGGTTTAAGGAATACTTACTATGTAGGTGGCCTTATGGCGTTTGAGCTTACAGAGAGAAATTCATCTTATGCCATGGCTCTGATTTGCAAGAACTTTGCAAACAGCAATGATTTGCCATTATTTCCTTACACTAAGAATTTGTTTCCCTTGCAAACTGAGTGCCAGAACAAGAATCCTAAAGAATTAGGTGAATTGCCAGGAGTGCAATTTCCTAATTTGCCTACTCTGAATAACTACTTAAAGTACTGGGCAACTCATCCAATCACTCAAAACAGGACTCTTTATACTTGGATTAATGAAGAAGGGACTCCAGTATCCCACAGGACCTATGGAGAACAGCATTTTAATGCTTCTTGCATTGCTCATAAGCTCTTAACAAGCCAAAAGCCAGTTATCAAGCCTGGTGACAGGGTTCTCCTGGTCTATGTCCCCGGTTTGGATTTTGTTGATGCCTTCTTTGGATGCCTAAGAGCTAAAGTCATACCAGTCCCCGTTCTTCCCCCAGATCCCATGCAAAGAAGTGGGCAAGCCCTAATGAAAATTGAAAATATTTCCAAGTCATGTGGCATAGTGGCAATTTTGTCAACCGTAGCTTATCACTCAGCAGTCCGTGCAGGTTCATTGAAAAACTTCATTTCATTAACTGGAAAAAAGGGGAAATCATCAGCAAGGTGGCCGAATCTTCCATGGTTTCACACTGATACTTGGGTCAAGAACTCCAAAAGTATGGTTTTGGAAAATCTTGATGATCTATGTGAACCTCAGCCTGGTGACTTGTGTTTCTTGCAATTCACCTCAGGATCAACTGGTGATGCTAAAGGAGTCATGATCTCTCATGGTGGGCTTATTCACAATGTAAAGTTGATGAGAAGTAGATACAAGAGCACCTCAAGGACAGTGCTCGTAAGCTGGCTTCCTCAGTATCATGACATGGGGCTGATTGGGGGACTTTTTACATCTCTTGTCAGTGGTGGATCTGCAGTTTTGTTTTCACCAATGACATTTATCAAGAAACCACTCTTATGGCTTGAAACTATCAGCAAGTATCAAGCAACCCATAGTGCTGGCCCTAACTTTGCCTTTGAGTTAGTGATTCGAAGATTGGAGTCTGACAAGGATAAGCTCCAGAATTTAGACCTCTCATCCTTGATTTTTCTTATGGTTGCTGCTGAACCAGTGAGACAGAAGACCTTGAAAAGATTCATTGAGTTAACCAGTCCTTTTGGCTTATCTCAAAAGGTGATGGCTCCTGGATATGGCTTAGCAGAAAATTGTGTGTTTGTCAGTTGTGCATTTGGAGAAGGTAAGCCTATCATTGTTGATTGGCAAGGAAGAGTTTGTTGTGGCTATTTTCATCCAGAGGATGCAGATGTTGACATTAGAATAGTTGATCCACAGACTTGTGAAGAGCTTCAGGAAGATGGAAAGGAGGGAGAAATATGGATTAGTAGTCCAAGTGCAGGACTAGGATACTGGGGAAGGGAAGAATTGAGTCAAGAAACTTTCAGGAATGAACTTCAGAATCATCCTGGACGAAACTACACAAGAACTGGAGACCTGGGAAGAATAATAGATCAGAAGCTATTCATCACAGGAAGAATCAAGGATCTTATCATTGTTGCTGGAAGAAATATTTACTCAGCAGATGTTGAAAAGACAGTTGAGACTTCATCTGAATTTCTTCGTCCTGGTTGCTGTGCTGTTGTTGGTGTCCCTGAGGAAATTCTATCAGCAAAGGGGATTTCTATTCCAGATGGCTCTGATCAGGTTGGCTTGGTTGTGATTGCAGAAGTAAGGGATGGTAAACAAGTTAGCAAAGATGTGATTGAGAATATTAAGACATGTGTGGCAGAAGAACATGGAGTCAGTGTTGCTTCTGTCAAGTTGGTCAAGCCTAGAACCATCAGCAAAACAACATCTGGAAAAATCAGAAGATTTGAATGTATCAAACAGTTCACAGATGAGGCACTAAACTTGGTACCACTAAGTCCAAAACCTGTTTTGACAAAGAACTCTTTGGTAAGGTCATTTACTACAGCAACATGCAGAGAAGAAAAACCACCCCAGCCCAAGCTAGTGAGAAGTATACCTGCACCTAGTAAAAGGATTAGTAAAAATGACATTGTAGAGTTCTTGAAAGGGCTTATTTCTGAGCAGACTGGAATCCCAATCAACAACATTTCAGTCACAGACAACCTGACATCCTATGGAATTGACTCAATTGGTGTGGTTAAAGCAACTCAAAAACTCTCAGATTTTCTAGGAACTCCAGTTGCAGCTATAGATGTTTTCACTGCATCCTGCATTGTAGAATTGGCTAACTTCTCTGAGGATCTTATATCAAAGACTCAGCCTCAGCTTTCAAGCAATCCATCCAATGTTCTAGAAGATGAGGTTGATTCTACAGAATTGGTTGTGGAGGTACCCAAGTCTCACCAATTCGGTATTCGTTTACTTCAACTCCTAGCACTTTTTTATATTTCTATAATGCTGGCCTCTCCTGCTTATCTATCTATCACTGCTTTTCTAAATTTCTTCCAAAGTGCCAGCAAATCAATTGATGGAGTTCCCTGGTTAAATTATTTAATTTCCCTAACTTTTGCACCTCTTGCTTGGATTCTTTGCATTGCTTCTACTTGCATCTGCATCTCAATATTTGGAAGTTCTTTCTTGGGGCTAAACTATGCTCTTACCTCCGAAATCTCTATCTATTCAATGGATTTTGTTAAATGGTGGGCACTATATAAGACCCGCGAAATTGCATCTAAAGTTCTGGCAATACACCTCAGAGGAACAGTGTTTCTGAACTACTGGTTTGAGATGTTGGGTGCAAGAGTTGGATCCTCAGTGTTGCTTGATACAGTTGACATCACAGACCCATCTCTGGTATCAATTGGAGATGAAGCTATCATTGCAGAAGGTGTTTTGGTTCAAAGCCATGAGGTAAAGAATGGAATTTTAAGTTTCCATCCTATAAGGATTGGCAAATATTCTTCTATTGGACCTTATGCTGTTATTCAAAAAGGAAGTGTTATTGGAGAAGGTGCTGAGGTACAGGCGTTGCAAAAAGTTGGAGGAGGCCAACATGTGCTCAAATCTACTAAGCTTAATAATGTTGATAAGAATGCAGAGCTGCCTGTTACTACCAGCAAAACTCAAAATGATATCTACCACTTTATGGGGATCTATCTTGTTGGCTTTCTCAGCTCCCTTTCTGGGGCCATTGCCTACTTCTTATATATCAGATTCTCCAAGCAACCTCCATCACTCCAACAATTTTCATTTGTTTGCATATGTGCGGCCTTCCACTGGATCCCATTTACCATCATTGCATATGCAACCATGTTTTCTGGTGTCCCATCAAATCCCATCACCTTTGCCATTTCATTTACCAGTGCCTACTTGCTTCATGGTCTCATACTCATCATTCTCACTAGTGCTTTTACTCGTCTCCTCATGTCTAATCAAAAGCAAACCCAATTTAAAACCTGGCTTCGCTATCAAATAACCACTTCCTGCCACCTTAGATGTGCAAAGCTTCTCTCAGGAACAGAAGCCTTCTGCATATATTTACGCCTTTTGGGTGCAAAAATTGGCAAGCATTGTTCCATTAGAGCCATCAACCCAGTTTCAAATCCACAGCTATTGTCAATTGGTGAGGGTGTCCATCTTGGAGATTTTAGCCGGATAATTACTGGTTTTCATTCTTCCAATGGATATGCTTGTGGAAAAATTGAGGTTCAGGATAATTCAGTTATTGGAAGTCAAAGCTTGATTCTCCCTGGTTCTCTTGTACAGAAGAATGTCATTCTGGGTGCACTTTCAGTTGCTCCAATGAATTCCATTCTCCAAGAGGGCAGTGTGTACATTGGATCACAATCTCAAGTTGTTGTCAGGAACTCAGTGAATGCTTCAGATGAGAGGGACATGGAATGCAAGAAAAAAGTTGATAATTTGGCTGCAGCAATATTACCCAAAGAAGACTCACAAAAAGTGACCTTGAACAGAACATGGTATCAGACCTTCTCAGCACTATTCATTCAGCCGTTGCTACAAACAGTTTTACCTTATGTCATAGTGGGTTTAGCAGTTTTTGTTCCTTTGAACTGGATTGTTCACCTAAAGAATGCCAAGATACTTCCAATCTATTGGTTGCTTCCTTTGTGTTGGGTTCTCTCGGGTGCTTTAGCTGCATTGGCGTGTGTTATAGCCAAATGGGTTCTTGTGGGAAGGAAGAAAGCAGGTGAAACAGTGCCAATATGGAGTCCAAGGATCATCATGGACAGCACATGGCAGGCCATTAGAACTTTAGTTGGAGATTATTTTATGGACATGACAAGTGGGTCATTTTTGTTTGTCCTATGGATGAAGTTGATGGGTGCAGATGTAGATATGGATTATGCAATTTATGTAGATAGCATGGGAGCCTTATTAAACCCTGAGATGGTGAAGATTGAAAGAGGGGGTTGTGTAGGAAGAGAAGCCTTGTTGTTTGGACATATATATGAAGGGGAAGGAGGTATGGTAAAGTTTGGAGAGATCAAAATAGGAGAAGATGGGTTTATAGGAAGTAGAGCTGTGGCCATGCCAGGGGTGCAATTAGAAAATGAGGGCAATCTTAGTGCTCTGTCACTTGCCATGAAAGAAGAAATCATTAGATCAAGATAA 5922 0.4053 MDPERSIEDQFSKLHPSLPVNTRIGIVGAGPSGLSAAYALARLGYENVTVLEKHHTVGGMCESVEIEGKVYDLGGQVLAASSAPIIFHLAKETGSVLEEMDSHKLAVIDPSSGEYQDIKVADDYVSVMSLTLEIQEKVKNCGRIGVHAVSDIAADLTPEYLECHGLKSIPKSVAYGYTASGYGFVQDMLYAYLHEFTRTSMAGKIRRFKGGYMSLWQKIAESLPLKLRCNTEVLAIRRNSDGVTVDVKSLNEVENLEFDKIIISGSFPLKYGRIYRSLPSTCIECEREVMDVSELEKDLFSKVETNDYYTTVLKIKGLEHLPVGFYYISEYMEDPSTIGNPVAMQKYYADTNIFLFWSYGNSVDIKGPTVKELAIKAIEAMGGEVENVILQRCFKYFPHVGSQDMKDGFYEKLESELQGLRNTYYVGGLMAFELTERNSSYAMALICKNFANSNDLPLFPYTKNLFPLQTECQNKNPKELGELPGVQFPNLPTLNNYLKYWATHPITQNRTLYTWINEEGTPVSHRTYGEQHFNASCIAHKLLTSQKPVIKPGDRVLLVYVPGLDFVDAFFGCLRAKVIPVPVLPPDPMQRSGQALMKIENISKSCGIVAILSTVAYHSAVRAGSLKNFISLTGKKGKSSARWPNLPWFHTDTWVKNSKSMVLENLDDLCEPQPGDLCFLQFTSGSTGDAKGVMISHGGLIHNVKLMRSRYKSTSRTVLVSWLPQYHDMGLIGGLFTSLVSGGSAVLFSPMTFIKKPLLWLETISKYQATHSAGPNFAFELVIRRLESDKDKLQNLDLSSLIFLMVAAEPVRQKTLKRFIELTSPFGLSQKVMAPGYGLAENCVFVSCAFGEGKPIIVDWQGRVCCGYFHPEDADVDIRIVDPQTCEELQEDGKEGEIWISSPSAGLGYWGREELSQETFRNELQNHPGRNYTRTGDLGRIIDQKLFITGRIKDLIIVAGRNIYSADVEKTVETSSEFLRPGCCAVVGVPEEILSAKGISIPDGSDQVGLVVIAEVRDGKQVSKDVIENIKTCVAEEHGVSVASVKLVKPRTISKTTSGKIRRFECIKQFTDEALNLVPLSPKPVLTKNSLVRSFTTATCREEKPPQPKLVRSIPAPSKRISKNDIVEFLKGLISEQTGIPINNISVTDNLTSYGIDSIGVVKATQKLSDFLGTPVAAIDVFTASCIVELANFSEDLISKTQPQLSSNPSNVLEDEVDSTELVVEVPKSHQFGIRLLQLLALFYISIMLASPAYLSITAFLNFFQSASKSIDGVPWLNYLISLTFAPLAWILCIASTCICISIFGSSFLGLNYALTSEISIYSMDFVKWWALYKTREIASKVLAIHLRGTVFLNYWFEMLGARVGSSVLLDTVDITDPSLVSIGDEAIIAEGVLVQSHEVKNGILSFHPIRIGKYSSIGPYAVIQKGSVIGEGAEVQALQKVGGGQHVLKSTKLNNVDKNAELPVTTSKTQNDIYHFMGIYLVGFLSSLSGAIAYFLYIRFSKQPPSLQQFSFVCICAAFHWIPFTIIAYATMFSGVPSNPITFAISFTSAYLLHGLILIILTSAFTRLLMSNQKQTQFKTWLRYQITTSCHLRCAKLLSGTEAFCIYLRLLGAKIGKHCSIRAINPVSNPQLLSIGEGVHLGDFSRIITGFHSSNGYACGKIEVQDNSVIGSQSLILPGSLVQKNVILGALSVAPMNSILQEGSVYIGSQSQVVVRNSVNASDERDMECKKKVDNLAAAILPKEDSQKVTLNRTWYQTFSALFIQPLLQTVLPYVIVGLAVFVPLNWIVHLKNAKILPIYWLLPLCWVLSGALAALACVIAKWVLVGRKKAGETVPIWSPRIIMDSTWQAIRTLVGDYFMDMTSGSFLFVLWMKLMGADVDMDYAIYVDSMGALLNPEMVKIERGGCVGREALLFGHIYEGEGGMVKFGEIKIGEDGFIGSRAVAMPGVQLENEGNLSALSLAMKEEIIRSR. 1974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03523 1973 Gene3D - 23 446 IPR036188 -
Seca3g03523 1973 Pfam AMP-binding enzyme 523 958 IPR000873 -
Seca3g03523 1973 CDD FAAL 501 1072 IPR040097 GO:0008610
Seca3g03523 1973 PANTHER DISCO-INTERACTING PROTEIN 2 DIP2 -RELATED 131 1722 - -
Seca3g03523 1973 Gene3D - 482 952 IPR042099 -
Seca3g03523 1973 ProSiteProfiles Carrier protein (CP) domain profile. 1124 1198 IPR009081 -
Seca3g03523 1973 PRINTS Adrenodoxin reductase family signature 23 45 - -
Seca3g03523 1973 PRINTS Adrenodoxin reductase family signature 47 60 - -
Seca3g03523 1973 Pfam Flavin containing amine oxidoreductase 32 266 IPR002937 GO:0016491
Seca3g03523 1973 SUPERFAMILY Trimeric LpxA-like enzymes 1348 1447 IPR011004 -
Seca3g03523 1973 SUPERFAMILY Acetyl-CoA synthetase-like 491 1075 - -
Seca3g03523 1973 Gene3D - 303 396 - -
Seca3g03523 1973 Gene3D Hexapeptide repeat proteins 1591 1741 - -
Seca3g03523 1973 SUPERFAMILY FAD/NAD(P)-binding domain 21 274 IPR036188 -
Seca3g03523 1973 SUPERFAMILY Trimeric LpxA-like enzymes 1773 1966 IPR011004 -
Seca3g03523 1973 ProSitePatterns Phosphopantetheine attachment site. 1153 1168 IPR006162 -
Seca3g03523 1973 Gene3D - 94 202 - -
Seca3g03523 1973 Pfam Phosphopantetheine attachment site 1129 1193 IPR009081 -
Seca3g03523 1973 SUPERFAMILY ACP-like 1122 1200 IPR036736 -
Seca3g03523 1973 Gene3D - 1116 1196 IPR036736 -
Seca3g03523 1973 Gene3D - 953 1079 IPR045851 -
Seca3g03523 1973 ProSitePatterns Putative AMP-binding domain signature. 680 691 IPR020845 -
Seca3g03523 1973 Gene3D Hexapeptide repeat proteins 1344 1449 - -
Seca3g03523 1973 SUPERFAMILY Trimeric LpxA-like enzymes 1608 1714 IPR011004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03523 Seca-Chr3 63431851 63438563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03523 649 1073 Monolignol Biosynthesis Gene Families AT1G20480 25.740 7.15e-21 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03523 - - adu:107477067 3085.82