Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03479 ATGGGTGAGGAGTGTGGCATAGCTGATGAAAACAGAACAGGAGGAAGTTCTGCTGAGCCAACTCCCAAACAAGACCAAGATTATAATGTGACTCAAGATTCTTCTGGAGGGGCAACAATACCATCGGCAATTCCCACTGTATCAGTTGTTTCTGTTGATGAGCCCTATGTGGGTCAGGAGTTTGAGACGGAAGCAACAGCACAAGCATTTTATAATGCATATGCCACAAATGTTGGATTCATCATACGTGCAAGTAAACTCTCACGATCAAGGCGTGATGGATCTGTTATAGGACGGACTCTTGTTTGCAACAAAGAGGGTTACAGAATGACTGGCAAGCGTGAAAAGGTTGTAAGGCAAAGGGCAGAGACAAGGGTTGGTTGCAGGGCAATGATTTTGGTGAGGAAAGTGAATTCTGGTAAATGGGTTGTTACGAAGTTTGTAAAGGAGCACACACATCCTCTAACTCCTATGGGAGGTAGAAGGGACTTCATTTATGAACAATGTCCGAGTGAACAAGATAAAATTCGGGAACTATCTCAGCAGTTGGCAATAGAGAAAAAGCGATCTGCAACTTATAAAAGACATCTTGAATTGATATTTGGTTACATCGATGAGCACAATGAGAGCCTTTCAAAGAAAATACAGCACATAGTAGATAGTGTGAAGGAGATGGAAACCAACGAACAACATAGTCAATGA 702 0.4231 MGEECGIADENRTGGSSAEPTPKQDQDYNVTQDSSGGATIPSAIPTVSVVSVDEPYVGQEFETEATAQAFYNAYATNVGFIIRASKLSRSRRDGSVIGRTLVCNKEGYRMTGKREKVVRQRAETRVGCRAMILVRKVNSGKWVVTKFVKEHTHPLTPMGGRRDFIYEQCPSEQDKIRELSQQLAIEKKRSATYKRHLELIFGYIDEHNESLSKKIQHIVDSVKEMETNEQHSQ. 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03479 233 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 7 228 - -
Seca3g03479 233 Pfam FAR1 DNA-binding domain 70 156 IPR004330 -
Seca3g03479 233 MobiDBLite consensus disorder prediction 14 40 - -
Seca3g03479 233 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03479 Seca-Chr3 62543444 62547453 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g03479 FAR1 7e-30 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03479 - - gmx:100777092 373.244