Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03456 ATGTCTTCTCTTTTTATGCAGCCCAAGCAAATTCACGAGATTAAAGACTTCCTCCTCACAGCCCGGAGGAAGGATGCACGCTCTGTGAAAATCAAGAGGAGCAGAGATGTGGTCAAGTTCAAGGTTCGATGCTCCAAGTATCTGTACACCCTTTGTGGTTTGATCCTGAGAAGGCTGATAAGTTGA 186 0.457 MSSLFMQPKQIHEIKDFLLTARRKDARSVKIKRSRDVVKFKVRCSKYLYTLCGLILRRLIS. 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03456 61 Gene3D - 7 53 IPR038464 -
Seca3g03456 61 PANTHER 60S RIBOSOMAL PROTEIN L38 8 52 IPR002675 GO:0003735|GO:0005840|GO:0006412
Seca3g03456 61 Pfam Ribosomal L38e protein family 8 52 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03456 Seca-Chr3 62076237 62076422 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03456 8 52 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 93.333 1.93e-26 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03456 K02923 - var:108325348 97.0561