Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03412 ATGGCTTCTTCACAAACTTCCTCCAACAATCTCCCCCTCAAACCAATCCCTGGAAGCTACGGCCTTCCCTTCTTCGGACCCTTAAGCGACAGACATGACTACTTCTACAACCAAGGACGAGACGAATACTTCGCCACACGGATCCAAAAGTACAACTCCACCGTCATCAGAACCAACATGCCACCTGGCCCCTTCATCTCCTCCAACCCTAAAGTCATCGCTCTCCTTGACGCTATCTCCTTCCCCATCCTCTTCGACAACTCCAAAGTCGAAAAACGCGACGTCCTCGACGGCACCTTCATGCCTTCCACTTCCTACACCGGCGGCTACCGCGCCTGCGCTTTCCAAGACACCACTGAACCCTCTCACAACCTCCTCAAGAGCTTCTACCTCAAACTCCTCGCTTCTAAACACCACACCTTCATCCCTCTCTTCCGAAACAACCTCTCCGACCACTTCACCGACCTGGAAGACCAGCTCGCCGGGAAATCAGGCAAGGCGAGCTTCAACACCTCCATCGGCACCGCCACGTTCAACTTCCTCTTCCGCCTCCTAACTGAAAAGGACCCCTCGGAGACCAAGATCGGGTCAAAAGGTCCCAGCCTCGTGGAGACGTGGCTCGCCGCTCAGCTTGCTCCACTCGCAACACTCGGTTTGCCTAAGATATTCAACTACGTCGAAGATTTGTTGATCAGAACGATTCCTTTCCCGGCGTGGACCGTGAAGTCGAGTTACAAGAAGCTTCACGAAGGTTTCTCAGAGGCAGGTACGGCGGTGCTGGACGAAGCAGAACGGGCGGGCATCAAGAGAGACGAGGCTTGCCACAATCTCGTCTTCATGTTAGGGTTCAACGCCTACGGTGGGTTAACGAACCAGTTCCCGATCCTAATCAAGTGGCTCGGATTGGCTGGTGAGGTTTTGCACAAACAGCTGGCTGATGAGATCAGGACCGTTGTTAAGGAAGAAGGCGGGGTGACAGTGGGGGCGTTGGATAAGATGACCTTGACTAAATCAGTGGTTTATGAGGCTCTCAGGATAGAGCCTGCTGTGCCGTACCAGTACGCTAAGGCGAGGGAGGATCTGGTGGTGGAAAGTCACGATGCTGCTTTTGAGATCAAGAAAGGTGAAATGCTCTTTGGATATCAACCGTTCGCGACGAAGGATCCAAAGGTGTTTGAGAATCCTGAGGAGTTTGTGGGCCATAGGTTCGTGGGAGATGGAGAGAAGCTGTTGAAATACGTGTACTGGTCTAACGGGCGTGAGACGGACCATCCTACAGCGGATAATAAACAGTGTCCAGCTAGGGATCTGGTGGTGCTCATGTGCAGGTTATACTTGGTGGAATTCTTCTTGCGCTATGATACTTTCACCTTCGAGTTTAAACCGGTTGTTTTGGGTCCTAATGTTACCATCAAGTCACTCACCAAAGCCTCCACCTTCTGA 1443 0.5232 MASSQTSSNNLPLKPIPGSYGLPFFGPLSDRHDYFYNQGRDEYFATRIQKYNSTVIRTNMPPGPFISSNPKVIALLDAISFPILFDNSKVEKRDVLDGTFMPSTSYTGGYRACAFQDTTEPSHNLLKSFYLKLLASKHHTFIPLFRNNLSDHFTDLEDQLAGKSGKASFNTSIGTATFNFLFRLLTEKDPSETKIGSKGPSLVETWLAAQLAPLATLGLPKIFNYVEDLLIRTIPFPAWTVKSSYKKLHEGFSEAGTAVLDEAERAGIKRDEACHNLVFMLGFNAYGGLTNQFPILIKWLGLAGEVLHKQLADEIRTVVKEEGGVTVGALDKMTLTKSVVYEALRIEPAVPYQYAKAREDLVVESHDAAFEIKKGEMLFGYQPFATKDPKVFENPEEFVGHRFVGDGEKLLKYVYWSNGRETDHPTADNKQCPARDLVVLMCRLYLVEFFLRYDTFTFEFKPVVLGPNVTIKSLTKASTF. 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03412 480 Pfam Cytochrome P450 309 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g03412 480 CDD CYP74 46 472 - -
Seca3g03412 480 PANTHER CYTOCHROME P450 26 11 453 - -
Seca3g03412 480 FunFam Allene oxide synthase, chloroplastic 11 479 - -
Seca3g03412 480 Gene3D Cytochrome P450 7 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g03412 480 SUPERFAMILY Cytochrome P450 11 457 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03412 Seca-Chr3 61346245 61348273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03412 2 478 Cytochrome P450 AT5G42650 50.939 2.12e-170 488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03412 K01723 - gmx:100810890 821.617