Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03384 ATGATCACAACTTCAGATTTCCCATTCCCAAAGCACCCTTCAGCTATGGAGGCTTTCTCAGTACAGTCACTGACCGCAACCGCCATTCCCTCTTCTCTGTCACGCAGAGAGTCTACAGAGAAACCTTCTGGGCATGTCAACCTTTCCAAATACTCGCATTTCATGAGGAACCCCTGCACCACAAAGCACAAACTCCGTAGCACCAGAGTTCAAGCTTCAGGTTCAACAAAATCCAGTACGGGTTCAGCTGAAGTGATTCCTGAGAAAACAGATTCTAAGGATGATAACCTAGTATTTGTTGCGGGTGCTACTGGAAGAGTTGGTTCACGAACAGTGAGGGAGCTTATAAAGCTTGGTTTTAGAGTCAGAGCTGGGGTGCGTAATGCTCAGAGAGCTGGTGCACTAATTAAGAGTGTTGAACAATTGAAGCTTGATGCTACAAGTGCAAGTGGAGGGAGTCAAGCTGTAGAGAAGCTTGAAATTGTGGAATGTGATTTGGAGAAACCAGATCAAATTGGATCAGCATTAGGGAATGCATCAACCGTGATATGTAGCATTGGTGCTAGTGAGAAGGAAGTTTTTGACATCACTGGACCCTGTCGAATAGATTATCAGGCCACCAAAAACCTAATTGATGCTGCAACTGTTGCTAAAGTAAACCACTTCATATTGGTTACTTCATTGGGAACAAACAAAATTGGCTTTCCTGCAGCTATTCTCAATTTGTTTTGGGGAGTCCTGATTTGGAAAAGGAAGGCAGAAGAAGCATTGCTAGCCAGTGGACTTCCATACACAATAGTGAGACCTGGAGGTATGGAGAGACCTACTGATGCTTACAAGGAAACTCATAACATAACCCTATCAACGGAAGATACTTTATTTGGAGGTCAGGTGTCAAACCTTCAGGTTGCTGAACTCATGGCAGTTATGGCCAAGAATCGTGATCTCTCCTATTGTAAAATAGTGGAAGTAATTGCAGAGACAACTGCACCACTGACTCCTATGGAAGAACTTCTTAAAAAGATACCTTCTCAACGGCCTTACATTTATTCACCCAAGGAACCGGTTATTGCAACTGTCAATGATCCAGATCCCTCTGCTGATGTTATGGCCACAGAACCTGACATTGCCACTGAGAAAGAAACTGCACCACCTAAACCAATGGCAAAACAGACACTTTCTCCTTATACTGTTTATGATGATTTAAAGCCACCGTCATCTCCATCTCCAGCTCAGCCTAGTGGTGGAAAACAAATAAAGATTAGTGATGCAGTGCCAACACCTAGTGCTTCAGATACTCCAAGTAGCGTGCCAGGAATAGATGGCATCTCTCAGACAACACCTTCCTCAAAAGGGCCAAAGTCTCTTTCTCCTTATGCAGCCTATGAGGATTTGAAGCCTCCCACTTCCCCTAGCCCAACACCAAGTAGCTCTAATGATAAACCTCTTACTGCATCAACATCTGTGGAATTTGCATCTTCATCTACTGGGGGAGATGTTGCTGAAAAGTACCCTTCTCAGGATTCAAATTCTTCTAACTCTCCCTACCCTGTATATCCTGACTTTAAGCCTCCCACCTCACCATCTCCTAATGCACCAACTATATCACTCTCCATATCTACTGTGGATGGGGTGCCCGAGATGGATACAGTATCAGGCAATGGACCAGCCCAACTTTCAATAGCAGATGAACCACAGGATGGACAGCATCTCCCTGGACCGAAGTCAAGACCACTTTCACCTTATACGATGTGA 1755 0.445 MITTSDFPFPKHPSAMEAFSVQSLTATAIPSSLSRRESTEKPSGHVNLSKYSHFMRNPCTTKHKLRSTRVQASGSTKSSTGSAEVIPEKTDSKDDNLVFVAGATGRVGSRTVRELIKLGFRVRAGVRNAQRAGALIKSVEQLKLDATSASGGSQAVEKLEIVECDLEKPDQIGSALGNASTVICSIGASEKEVFDITGPCRIDYQATKNLIDAATVAKVNHFILVTSLGTNKIGFPAAILNLFWGVLIWKRKAEEALLASGLPYTIVRPGGMERPTDAYKETHNITLSTEDTLFGGQVSNLQVAELMAVMAKNRDLSYCKIVEVIAETTAPLTPMEELLKKIPSQRPYIYSPKEPVIATVNDPDPSADVMATEPDIATEKETAPPKPMAKQTLSPYTVYDDLKPPSSPSPAQPSGGKQIKISDAVPTPSASDTPSSVPGIDGISQTTPSSKGPKSLSPYAAYEDLKPPTSPSPTPSSSNDKPLTASTSVEFASSSTGGDVAEKYPSQDSNSSNSPYPVYPDFKPPTSPSPNAPTISLSISTVDGVPEMDTVSGNGPAQLSIADEPQDGQHLPGPKSRPLSPYTM. 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03384 584 CDD SDR_a5 98 328 - -
Seca3g03384 584 MobiDBLite consensus disorder prediction 64 88 - -
Seca3g03384 584 Gene3D - 94 345 - -
Seca3g03384 584 FunFam Protein TIC 62, chloroplastic 94 345 - -
Seca3g03384 584 PANTHER PROTEIN TIC 62, CHLOROPLASTIC 16 584 IPR044719 -
Seca3g03384 584 MobiDBLite consensus disorder prediction 64 86 - -
Seca3g03384 584 Pfam NAD(P)H-binding 102 313 IPR016040 -
Seca3g03384 584 MobiDBLite consensus disorder prediction 532 559 - -
Seca3g03384 584 MobiDBLite consensus disorder prediction 397 584 - -
Seca3g03384 584 MobiDBLite consensus disorder prediction 424 454 - -
Seca3g03384 584 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 96 341 IPR036291 -
Seca3g03384 584 MobiDBLite consensus disorder prediction 476 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03384 Seca-Chr3 61114654 61120578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03384 90 220 Monolignol Biosynthesis Gene Families AT5G58490 28.571 9.46e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03384 - - gmx:100779056 753.436