Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03303 ATGGTGCTGTTTGATCAAGGCACTTATGACAAGCTCCTTTCTGAAGCACCCAAATACAAGCTCATCACTCCTTCCATTCTCTCTGATCGTTTGAGGATTAATGGATCACTTGCAAGGAAGGCTATAAGAGAATTGATGGCTAGAGGTTCAATCAGGATGGTGTCTGCTCACTCTAGCCAGCAGATTTACACCAGGGCTACTAACACCTAG 210 0.4476 MVLFDQGTYDKLLSEAPKYKLITPSILSDRLRINGSLARKAIRELMARGSIRMVSAHSSQQIYTRATNT. 70
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03303 69 PANTHER 40S RIBOSOMAL PROTEIN S25 1 69 IPR004977 -
Seca3g03303 69 Pfam S25 ribosomal protein 1 66 IPR004977 -
Seca3g03303 69 Gene3D - 1 69 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03303 Seca-Chr3 59835528 59838060 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03303 1 69 Cytoplasmic Ribosomal Protein Gene Family AT2G21580 91.304 1.83e-43 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03303 K02975 - gmx:100789867 133.265