Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03289 ATGAAGGACGCAGATGTGTCAAGGCAGATCCAGCAGATGATTAGGTTCATCCGCCAAGAGGCTGAGGAGAAAGCTAATGAAATTTCTGTTGCCGCAGAGGAGGAATTCAATATTGAGAAACTACAATTACTTGAAGCAGAAAAGAGAAAGATAAGACAAGAGTACGAGCGAAAAGCCAAACAAATTGACATTCGTAGAAAGATTGAATACTCCATGCAGCTGAATGCAGCAAGAATAAAGGTGCTTCAAGCACAAGATGAAGCTGTGAATTCTATGAAGGATGCTGCTAAAAAGGCTCTTTTACGTGTCTCAAGTGATAAGAAATTATACAAGAAACTCCTCAAAGACATGATTGTTCAGGGTTTACTACGTCTGAGGGAACCATCTGTGCTACTAAGATGCAGAGAGGGTGACCGAAAGCTAGTTGAGTCATTGCTAGAGGAAGCCAAAAAAGAATACTCAGAAAAAGCCAAAATGCAAGCACCAAAGATTATCCTTGATGATCGTGTTTATCTCCCACCACCTCCTAAAAACGCCGCTGTGGATTCCCATGAACCATTTTGCTCTGGAGGAGTGGTATTGGCTTCGGAGGATGGGAAGATAGTGTTGGAGAACACCCTTGATGCAAGGCTTGATGTTATCTTCCGGCAGAAACTGCCTGAGGTACGAAAGCGCCTGTTAGGTTGA 687 0.4309 MKDADVSRQIQQMIRFIRQEAEEKANEISVAAEEEFNIEKLQLLEAEKRKIRQEYERKAKQIDIRRKIEYSMQLNAARIKVLQAQDEAVNSMKDAAKKALLRVSSDKKLYKKLLKDMIVQGLLRLREPSVLLRCREGDRKLVESLLEEAKKEYSEKAKMQAPKIILDDRVYLPPPPKNAAVDSHEPFCSGGVVLASEDGKIVLENTLDARLDVIFRQKLPEVRKRLLG. 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03289 228 Hamap V-type proton ATPase subunit E [atpE]. 8 228 IPR002842 GO:0033178|GO:0046961|GO:1902600
Seca3g03289 228 Pfam ATP synthase (E/31 kDa) subunit 16 226 IPR002842 GO:0033178|GO:0046961|GO:1902600
Seca3g03289 228 Gene3D - 1 62 - -
Seca3g03289 228 SUPERFAMILY V-type ATPase subunit E-like 87 227 - -
Seca3g03289 228 Coils Coil 38 61 - -
Seca3g03289 228 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 228 IPR002842 GO:0033178|GO:0046961|GO:1902600
Seca3g03289 228 Gene3D - 92 228 IPR038495 -
Seca3g03289 228 Coils Coil 14 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03289 Seca-Chr3 59628548 59630751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03289 1 228 Primary Pumps ATPases(2) AT3G08560 71.053 5.30e-116 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03289 K02150 - gmx:100791813 387.497