Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03279 ATGAAGAAAATGAAGAAATCAAGGTCAATTAAGCTTTCTGATTTGGAGGCTCTTCAATCACCACCTCCAAGGAGGAGCTTATCCCAACCAAGAAAGCCAACACTTCTTCATGTTCCATCCACTACAGAATCCCCACAAAAGCAGAAGCAGAAACCTTTGGTGAGAAGGTCACCCAATTATATGAAACCCACCACCAGTTCAGATGCAAAAAAGGAGTTTTTGCTGGCGAGTCTTCGGAATACCCAATCCAGTTTAGATGGTAAGAATTTACTACAAACAAGTTCGAGTAATTCAAAAGCTACTTCTGTTTCTAGCAAAAACCCTGCAAAATCTTTGCCAAGATCATCTAGTATGAGTTTGGTGAGAACATTAACAAAGATCCCTAGTTTTAAGCCTTGTAGAGCTTGCCCGAGAAAATCTACCACAGCAGTTCTGTGTGCAGAAATTAGTGCACCAGACAGAGCTACCTGCTCTTCAACTTTGAAACACTGCAAGTTCCCTGTGTACCTCAAGCTTAATCCTGGGAGTACTGAGTCTGAGGGAGCTTCAATCATGAAGGTTTGCCCATACACATATTGTTCTCTTAATGGCCATCGCCATGATGCTTTGCCTCAATTGAAGAGCTTCATGTCAGCAAGTAGGCGTCTTCTGAAGACTCAAAAGAATATAAAGCTGGAAGGTCTTAGCCCTCCAAGATTGCAGGTGCCCTGTGAGACAAAGGACTCTGATAATGAGCAGATTATCTTTGATGGAAAACCTGCATGTGATGAAGCTGATATGGGTAATCCAATAATCACTCCCTTGGCACAAGAAATTGGTATGGATTTGTTTATTGAAATCTATGCCAAGGAAAAGGAAGGAGCTGACAAAATGGGAAGATTCAACTCCGTCAAACACCTTGAGGATCAAAAAGGTACCGAGTTTGCAATTGAGGAGAATGGCAATGCAGCAGAAGAGAATGGTGTCAAGCAAGTTAATCCTCCAGGCATGCCTCATGATCTCCCTAAGTCTGAGATTGCTCTCGAGGAGGATTTCAAAAACAACTTTAATGCTGCTGCAATTGAAGCAGATACGGAGGGGAGCTTTCATCAAGAACTAAGTGCTGGAGATGCAGATGAAAACCACCCACCTAGCTGGTTTGATGAAGAAATATGTACGGGAAGCTACTGCAGTGAGGTTCACTATGATGGGGAACACGTGGAAAATATTGAATTGGATGACTTTGATTCCCAAGATACTGATATGGAGTGGGAGGAGGAACAACTTTGTGCAGTCAACCATGAAGACAATATCAATTCTTCTGACATGGAGGAGGAGACTGACTCAAAATTTGAGTCCTTATCAGAGAGTTCGTATGGTATATCTGAAATATGGTTAAATGACATTCTTAGCAACCATTATGCAGACATTCTGTTAGAAGAAGCACTCCAGGCAACCAAAGAAGAGAAAAGCACCTGTTTTGAGGCACAACCTCATACTGATTCTGTCCTGGAAGGCACAAATGATAGCATCAAGTTCAAGATTCAAGAAACTGATTATCCATCCAACTGCACAAGTTATGAGTATGACCAATCTTCTTTGACAGAGGAAGTACTTCACCATCTGACAAACTCAGAAGATGATAATAGAGAAAGTGAAAAACATGTGGATGATGGGACCAATTGTGCCTCAGTGGTACTTGATGAAGATACAACAGAAAATAGTAAAGGCTACAATATCACTGAAGCTTGCAAGATTGATGAGAGCTCTGAAGACAGCATCACTAGCCTAAAGATAAATGATAAAGGAATTAACCAGAAGAACCAAATTCACTCGCCTGATGAGCCCGAAGAAAGCACCATTATTGTTCAGGACCAGAAATTATTGGAGGAAGATCAAGTTAGAGCTAGTAAGTTCCACACCGCATGCTGCATAGGTGGTGAAGAGCAGAGCACAGGCAAGAATTGTCAATGGGCAGCTAGGCACAAGAGACCTGTGCAAGATTTTGAGGAAATGAGAAAAATCAACCCACGGAAGCCAAATTTCCTGCCCTTGCTTCCTGACCCAGAACCAGAAAAGGTTGACCTGAAGCATCAAATGATGGATGAAAGAAAAAATGCAGAGGAATGGATGCTTGATTTTGCACTCAGACAAGCTGTCACAAAACTTGCTCCAGCTGGGAAAAGGAGGGTTGCGTTGCTCGTTGAAGCTTTTGAAACAGTAATGTCAATACCCAAATGTGAAACCCATATGAAAAATGATTCACCCTTTGCTCATGCAAGACCTATTCAAGCTTGTAGCTAA 2283 0.4192 MKKMKKSRSIKLSDLEALQSPPPRRSLSQPRKPTLLHVPSTTESPQKQKQKPLVRRSPNYMKPTTSSDAKKEFLLASLRNTQSSLDGKNLLQTSSSNSKATSVSSKNPAKSLPRSSSMSLVRTLTKIPSFKPCRACPRKSTTAVLCAEISAPDRATCSSTLKHCKFPVYLKLNPGSTESEGASIMKVCPYTYCSLNGHRHDALPQLKSFMSASRRLLKTQKNIKLEGLSPPRLQVPCETKDSDNEQIIFDGKPACDEADMGNPIITPLAQEIGMDLFIEIYAKEKEGADKMGRFNSVKHLEDQKGTEFAIEENGNAAEENGVKQVNPPGMPHDLPKSEIALEEDFKNNFNAAAIEADTEGSFHQELSAGDADENHPPSWFDEEICTGSYCSEVHYDGEHVENIELDDFDSQDTDMEWEEEQLCAVNHEDNINSSDMEEETDSKFESLSESSYGISEIWLNDILSNHYADILLEEALQATKEEKSTCFEAQPHTDSVLEGTNDSIKFKIQETDYPSNCTSYEYDQSSLTEEVLHHLTNSEDDNRESEKHVDDGTNCASVVLDEDTTENSKGYNITEACKIDESSEDSITSLKINDKGINQKNQIHSPDEPEESTIIVQDQKLLEEDQVRASKFHTACCIGGEEQSTGKNCQWAARHKRPVQDFEEMRKINPRKPNFLPLLPDPEPEKVDLKHQMMDERKNAEEWMLDFALRQAVTKLAPAGKRRVALLVEAFETVMSIPKCETHMKNDSPFAHARPIQACS. 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03279 760 MobiDBLite consensus disorder prediction 1 71 - -
Seca3g03279 760 Pfam Plant calmodulin-binding domain 660 736 IPR012417 GO:0005516
Seca3g03279 760 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 2 736 IPR044681 GO:0005516
Seca3g03279 760 SMART CaM_binding_2 623 736 IPR012417 GO:0005516
Seca3g03279 760 MobiDBLite consensus disorder prediction 85 120 - -
Seca3g03279 760 MobiDBLite consensus disorder prediction 33 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03279 Seca-Chr3 59498129 59500411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03279 642 760 Calmodulin-binding Proteins AT2G38800 47.934 1.64e-29 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03279 - - gmx:102670203 975.696