Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03275 ATGGACTCGCGACGCGCCTCGCGGGCCATCATCGACCCCAAATTAAGGCGCGTCGGATTCTTTGCTGCGCGGGCAGAACCCGACCCGCCCGAACACGACCCCCTGCCGCTATCGGAGTCTCCCTCCTCCATCACGATACCGCCTCCACGTCATCTTTCCGAGCGGACCGCCGCCGTGCCCGTCCCAGAGACTGGGCTCCGGCGCCAGGTTTCCGGCGACCGGCTGCCTATCGGGAGCTACAACCCTTCCGAGTCGCTGCTCGGAACCTCGCCGGCAGCGTCGCATTCTTCTAGCGGTGCCGGCATCGGCGATGGAGAGTTCTCTGAGGACTGTTCTGGCGCTGGCTGGTTCCGTGGCAGCGAATTGAGTTTCCGCGGCGCAGGGTTCGATTTGCCGGCCGTGAAGCCTCCGGAAAATTCGACGGAGAACAGCTTCGCTGTGGCGGTGAATGTGAAAAATATTCCTGGAGGCACTGAAAAGAGGGAAGGGGCTAGCAAAGAAGTATGCCCTGATCTGCCATCAATTTCGAAGCCACTGAAAGAAAAAACTACAAAGGCAGAAAGACGAGCCTTGCAGGAGGCACAAAGAGCTGCAAAAGCTTCTTCTAAAGCTGGAGGAAGTACAGCAGTCACTGAATCTGGCAGAGCAGCCCCAGGTAAAAGTATGAAGCAAACTTCACAAAAGAAAGTTGGTACTCCTGTTACATCATCGGTGGCTACTGATAAGAAATTTGGAGATCGTCCTTTGGAGAAAGAGAGGAAAAAAGATGCTCCTCCACCGCGAATGCAATTTGATGACAAAAACAAGGTGGAAAAGGCCAAGAGGCGTGCAGTAATGAATCAAACTGAAGCTAGAAACCGAGTTGAATTATTTCAGCATTTGCCTCAATATGAACATGGGACTCAGCTTCCTAAACTCGAATCGAAGTTTTTCCAACTTGATTCAGTGCATCCTTCTGTGCTCAAGGTTGGATTGCGTTATTTGGCTGGAGATATATCAGGGGGTAATGCTCGTTGTATTGAAATGCTTAGAGCATTGCAGGAAGCCATTATAGACTACTCCACACCACCTGAAAAAGTCCTTGTTAGGGATTTAACTGCAAAAATCAGTAGTTATGTTTCATTTTTTACTGAATGCAGACCGCTTTCTATTAGCATGGGAAATGCAATTAGGTTTGTAAAGAGTCGTATTGCCAAGTTGCCTTTAAGTCATACGGAATCTGAGGCAAAAGCAGCTCTTTGTTCTGATATTGACCAATTCATTAATGAAAAAATAATTCTTGCTGATAAGGTGATTGTTGGACATGCTGCTACAAAGGTTAGGGATGGAGATGTTCTTCTTACATATGGATCATCTTGTGTTGTTGAGATGATTCTTTCACATGCCCATGATCTTGGGAAACAGTTCCGAGTTGTGGTGGTAGGCTCACGGCCAAAGCTTGAAAGTCAGGCCTTACTTCGTAGGCTGGTTGCCAAGGGCCTGAATTGTACATATACTCATATAAATGCCATTTCTTATATCATGCATGAGGTCACACGAGTTTTTCTGGGAGCTTCTTCCATTCTGTGTAATGGAACTGTATATTCAAGGGTTGGGACTGCATGTGTTGCAATGGTGGCACATGCATTTCGTGTTCCTGTATTAATCTGTTGTGAAGCTTATAAGTTTCATGAGAGGGTGCAACTTGATTCAATATGTTCCAATGAACTAGGTGACCCAGATGCTGTTGCCATGGTTCCTGGAAGAACGGATGTCAATTATCTACACAATTGGACTAATGAAGGCAATTTGCAGCTTTTGAATTTGATGTATGATGCTACTCCTTCAGATTATGTCTCGGCGATTATTACAGATCATGGAATGGTAAGTTGA 1872 0.4701 MDSRRASRAIIDPKLRRVGFFAARAEPDPPEHDPLPLSESPSSITIPPPRHLSERTAAVPVPETGLRRQVSGDRLPIGSYNPSESLLGTSPAASHSSSGAGIGDGEFSEDCSGAGWFRGSELSFRGAGFDLPAVKPPENSTENSFAVAVNVKNIPGGTEKREGASKEVCPDLPSISKPLKEKTTKAERRALQEAQRAAKASSKAGGSTAVTESGRAAPGKSMKQTSQKKVGTPVTSSVATDKKFGDRPLEKERKKDAPPPRMQFDDKNKVEKAKRRAVMNQTEARNRVELFQHLPQYEHGTQLPKLESKFFQLDSVHPSVLKVGLRYLAGDISGGNARCIEMLRALQEAIIDYSTPPEKVLVRDLTAKISSYVSFFTECRPLSISMGNAIRFVKSRIAKLPLSHTESEAKAALCSDIDQFINEKIILADKVIVGHAATKVRDGDVLLTYGSSCVVEMILSHAHDLGKQFRVVVVGSRPKLESQALLRRLVAKGLNCTYTHINAISYIMHEVTRVFLGASSILCNGTVYSRVGTACVAMVAHAFRVPVLICCEAYKFHERVQLDSICSNELGDPDAVAMVPGRTDVNYLHNWTNEGNLQLLNLMYDATPSDYVSAIITDHGMVS. 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03275 623 Gene3D - 428 623 IPR042529 -
Seca3g03275 623 MobiDBLite consensus disorder prediction 218 239 - -
Seca3g03275 623 MobiDBLite consensus disorder prediction 22 110 - -
Seca3g03275 623 Pfam Initiation factor 2 subunit family 332 622 IPR000649 GO:0044237
Seca3g03275 623 MobiDBLite consensus disorder prediction 178 194 - -
Seca3g03275 623 SUPERFAMILY NagB/RpiA/CoA transferase-like 317 622 IPR037171 -
Seca3g03275 623 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 39 622 - -
Seca3g03275 623 MobiDBLite consensus disorder prediction 76 97 - -
Seca3g03275 623 MobiDBLite consensus disorder prediction 243 264 - -
Seca3g03275 623 MobiDBLite consensus disorder prediction 153 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03275 Seca-Chr3 59468302 59474340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03275 1 622 Eukaryotic Initiation Factors Gene Family AT5G38640 58.182 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03275 K03680 - gmx:100778711 920.613