Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03260 ATGTCTTTAACCTTTCAAGAGCCAACACCTGATTCCTTGCCTCAATTCGATAACACTGATGAATGGATTCCTCAAGAAGGGCAATTATTTAACAGTGATGTTGATGCTTATAACTTTTATCATGGATTTGCACGAAAAAGCGGTTTTTCGATTAGACGTAATCATATTTACAAATCTAGTAAGAATCAATCTGAGGAGAATCCATTAGGTATTTATAAAAGAGAATTTGTTTGTCATCGTGCTGGTTTGGCTAAGGAGCGTAGAATTGTTGAAGGGAATAGTCAACGAAAACGAAAAACTTCAAGATGTAACTGTGGTGCAAAGATGTTGACTGCGAAAAGAATTATTGGCTTTGAGGAAAAATGGGTGGTTAAATATTTTAACTGTGGTGCAAAGATGTTGATTGCGAAAAGAATTATAGTTTTAATCAATATAATGGCTACTGATTTTTTAGCAATCTGTCATGTGTACAAGACAATCTGTCATCTGCTGATTTTGCTGATATTTTTGGCAATCTGTCATGTGTACAAGACCATTCTGTTATATAATGGCTGCTGA 558 0.3477 MSLTFQEPTPDSLPQFDNTDEWIPQEGQLFNSDVDAYNFYHGFARKSGFSIRRNHIYKSSKNQSEENPLGIYKREFVCHRAGLAKERRIVEGNSQRKRKTSRCNCGAKMLTAKRIIGFEEKWVVKYFNCGAKMLIAKRIIVLINIMATDFLAICHVYKTICHLLILLIFLAICHVYKTILLYNGC. 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03260 185 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 16 128 - -
Seca3g03260 185 Pfam FAR1 DNA-binding domain 38 128 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03260 Seca-Chr3 59274236 59274793 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g03260 FAR1 9.9e-13 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03260 - - ccaj:109802755 182.185