Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03257 ATGGGAATGTGTAACTGCTCTTTTCTTTTTTCCTCCCATTTTTCTGTTTGGGTTTATTTTGTTCCTTCCCCTGTTTCTATGCTTGTGCTTTTAGATTTATACAGACTATGCACTTTTTGCTGGCAGCCTACCCAAGAAATATCTTGGAAGAATGAAGCTTACTTGTTATTTCCAGTTCATTTGGATGGAACGTTGCTAGATAATGCTAAAACAATGAAAGCCAAGAAGGAGTTCTATTCTGCCTCAGATGTTCTTCAAATATTTCAGCAGCTTTGTGCAGGACTCAAGCATATGCACAGTTTAGATCCTCCATATGCACATAATGATGTCAAACCTGGTAATGTTCTTATAACACATAGAAAAGGACAACCACCTCTTGCCATACTGATGGATTTTGGCAGTGCTCGACCTGCCAGGAGGCAAATTCGCTCCCGATCCGAGGCACTGCAGTTGCAGGAGTGGGCATCTGAACATTGCTCTGCTCCTTTCCGTGCTCCAGAGCTGTGGGATTGCCCAAGCTATGCTGATATAGATGAAAGGTCTGATATTTGGTCACTAGGATGCACCTTGTATGCAATAATGTATGGAGTATCTCCGTTTGAATATGCACTTGGAGAATCTGGTGGAAGCTTGCAACTGGCCATTATAAATGCTCAGGTCAAATGGCCAGCTGGACCTAAGCCTCCATACCCAGAAGCTCTTCATCAGTTTGTGACATGGATGCTTCAGCCCCAGGCTACTGTGCGGCCCCGAATAGACGATATCATAATCCATGTTGATAAGTTGATTGCAAAGTTCTCTCCTTGA 807 0.4337 MGMCNCSFLFSSHFSVWVYFVPSPVSMLVLLDLYRLCTFCWQPTQEISWKNEAYLLFPVHLDGTLLDNAKTMKAKKEFYSASDVLQIFQQLCAGLKHMHSLDPPYAHNDVKPGNVLITHRKGQPPLAILMDFGSARPARRQIRSRSEALQLQEWASEHCSAPFRAPELWDCPSYADIDERSDIWSLGCTLYAIMYGVSPFEYALGESGGSLQLAIINAQVKWPAGPKPPYPEALHQFVTWMLQPQATVRPRIDDIIIHVDKLIAKFSP. 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03257 268 PANTHER SERINE/THREONINE-PROTEIN KINASE 16 42 266 - -
Seca3g03257 268 Pfam Protein kinase domain 50 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g03257 268 ProSiteProfiles Protein kinase domain profile. 1 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g03257 268 SUPERFAMILY Protein kinase-like (PK-like) 47 258 IPR011009 -
Seca3g03257 268 ProSitePatterns Serine/Threonine protein kinases active-site signature. 105 117 IPR008271 GO:0004672|GO:0006468
Seca3g03257 268 SMART serkin_6 18 263 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g03257 268 Gene3D Transferase(Phosphotransferase) domain 1 27 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03257 Seca-Chr3 59251924 59255519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03257 51 258 EF-hand Containing Proteins AT4G04710 25.352 8.26e-10 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Seca3g03257 Pkinase 6.8e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03257 K08856 - gmx:100803659 441.039