Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03256 ATGAACAACCACCCTGCAGGAGATGAAAGGGATCACCATCAGTACTGTCAGAAGAAGAGGAAATCAACAAGCTCTGATCAATCCATGAGGAGTAGCAATTCACGGAGAAGATTCTGCAGCAACAAAAATCATGATCAGGAAGTGAAAGGATCAGGAGGAGTCTCCACCACACTGAAGCTTTATGATGACCCTTGGAAGATCAAGAAGACGCTAACTGACAGTGATCTTGGAATCTTGAGCAGACTCTTACTGGCTGCAGATTTGGTGAAGAAACAGGTTTTGCCTATGTTGGGTGTTGATCATGCAAGAGCTGCTGAGACTGAGGAAGGTTCCCCAGTTAGAGTTTGGGACATGGACACCAAAACCATGCACCAACTCGTTCTCAAGCGATGGTCTTCATCTAAGAGCTATGTTCTTATTGGAAAATGGAACCAAGATTTCGTCAGAAGAAGAGAGCTTAAGAAAGGGGATGAGATTGGCTTCCACTGGGATCCTTATAACTGTGCTTTCAACTTCTGTGTTCTAAAACGGGCTATGCCGCTCAATTAG 549 0.4463 MNNHPAGDERDHHQYCQKKRKSTSSDQSMRSSNSRRRFCSNKNHDQEVKGSGGVSTTLKLYDDPWKIKKTLTDSDLGILSRLLLAADLVKKQVLPMLGVDHARAAETEEGSPVRVWDMDTKTMHQLVLKRWSSSKSYVLIGKWNQDFVRRRELKKGDEIGFHWDPYNCAFNFCVLKRAMPLN. 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03256 182 MobiDBLite consensus disorder prediction 1 53 - -
Seca3g03256 182 SUPERFAMILY DNA-binding pseudobarrel domain 63 174 IPR015300 -
Seca3g03256 182 MobiDBLite consensus disorder prediction 1 25 - -
Seca3g03256 182 Gene3D - 64 178 IPR015300 -
Seca3g03256 182 CDD B3_DNA 65 176 IPR003340 GO:0003677
Seca3g03256 182 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 26 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03256 Seca-Chr3 59194977 59195525 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03256 67 162 RAV Transcription Factor Family AT1G50680 33.981 8.28e-07 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03256 - - gmx:102670334 281.952