Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03225 ATGGAATTTGATAATGGTAAACAGAAGCAAAGCTGCACATTTAGAGAGCTCAAGTTGGTTACCTTAGTTGCTCTATGCCTCATTTTAATTTCTCCTGCTGATGCATTTGATCCATTGGATCCAACTGGGAATGTGACCATAAGATGGGATATCATGTCCTGGACATCAGATGGTTATATGGCCACTGTGACATTGTTTAACTTTCAACTGTACCGGAATATAATGAACCCTGGATGGACTCTAGGATGGACATGGGCAAAGAAAGAAATTATATGGGCTGTGATGGGAGCTCAAGCTACAGAACAAGGAGATTGTTCCAAGTTCAAGTTGAAGATTCCTCATAGCTGCAAGAGGAGCCCTCAAGTGGTTGACTTGCTACCAGGAGCTCCTTTCAACATGCAATATAACAACTGCTGCAAGGGGGGTGTGCTAACATCTTGGGGGCAGGACCCTAATGGTGCAGTTTCAGCATTTCAGCTGGGTGTGGGGCTCTCTGGCACCTCTAACAAGACAGTGAAACTGCCCAAAAACTTCAAATTGCTAGGTCCAGGACCAGGGTATTCATGTGGCCCTGCAAAACTTGTTCCAGCCACTGTCATCCTCACAGATGATCATAGGCGAAAAGCTCAAGCATTGATGTCCTGGAATGTGACATGTACTTATTCACAGTTTCTTGCCTCCAAGAACCCTGGCTGTTGTGTTTCCTTATCATCTTTCTATAATGATAAAGTGACACCTTGCCCAACTTGTGCTTGTGGTTGTCAGAACAATGATACCTGTGTCACGATATTATGCAGGAGCGATTCCAAGATCCTACAAGAGGATGAAACAAAGATCCGGAAGAAGGATAATAGCATCACACCAAAACCATTGTTAAGATGCACACACCACTTGTGTCATGTCCGGGTACACTGGCATGTGAAAGACAATTACAAGGACTATTGGCGTGTCAAGATTGCCATTATCAACTTTGATTACAGGATGAATTACACACAATGGTCTCTTGTTATACAACATCCCAATCTCAATAATGTCACTCAAGTCTATAGTTTTGAGTATATGCCACTTCTTCCCTATGAGGCCATAAATGACACAGGCATGTTCTATGGTTTGAAGTATTACAATGATTTATTGATGGAAGCTGGGCCTAAAGGCAATGTTCAGTCTGAGGTACTTATGAAGAAGGACAAGAACACATTTACACTGAAGCAGGGATGGGCATTCCCTAGGAGGGTCTACTTCAATGGTGATGAATGTATGCTTCCACCTCCTGATTCATACCCTTTCTTGCCAAACTCTGCACATAGACCATCAACAAGTATTGTATTGATGGCAGCCTATGTGATTTTTGCATCATTTTTCCATTTGTTTGTGACCCTTTTGTGA 1386 0.4264 MEFDNGKQKQSCTFRELKLVTLVALCLILISPADAFDPLDPTGNVTIRWDIMSWTSDGYMATVTLFNFQLYRNIMNPGWTLGWTWAKKEIIWAVMGAQATEQGDCSKFKLKIPHSCKRSPQVVDLLPGAPFNMQYNNCCKGGVLTSWGQDPNGAVSAFQLGVGLSGTSNKTVKLPKNFKLLGPGPGYSCGPAKLVPATVILTDDHRRKAQALMSWNVTCTYSQFLASKNPGCCVSLSSFYNDKVTPCPTCACGCQNNDTCVTILCRSDSKILQEDETKIRKKDNSITPKPLLRCTHHLCHVRVHWHVKDNYKDYWRVKIAIINFDYRMNYTQWSLVIQHPNLNNVTQVYSFEYMPLLPYEAINDTGMFYGLKYYNDLLMEAGPKGNVQSEVLMKKDKNTFTLKQGWAFPRRVYFNGDECMLPPPDSYPFLPNSAHRPSTSIVLMAAYVIFASFFHLFVTLL. 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03225 461 PANTHER PROTEIN COBRA 23 447 IPR006918 GO:0010215|GO:0016020
Seca3g03225 461 PIRSF COBRA 9 460 IPR006918 GO:0010215|GO:0016020
Seca3g03225 461 Pfam COBRA-like protein 59 222 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03225 Seca-Chr3 58060702 58063310 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03225 11 455 COBRA Gene Family AT3G02210 57.589 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03225 - - gmx:100813134 853.203