Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03213 ATGGCAGCAAAGCTCCTGCATTCTTTAGCAGATGACAACCCAGATCTGCAGAAGCAGATAGGATGCATGACTGGGATTTTCCAACTCTTTGATCGTCACCAAGTTCTCACTGCTCGCCGCATTACCCAGAAGAGGCTTCCTTCTGGTATAATATTCCCCTAA 162 0.4691 MAAKLLHSLADDNPDLQKQIGCMTGIFQLFDRHQVLTARRITQKRLPSGIIFP. 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03213 53 PANTHER LONGIFOLIA PROTEIN 1 46 IPR033334 GO:0051513
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03213 Seca-Chr3 57842452 57842613 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03213 1 49 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 59.615 9.18e-13 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03213 - - gmx:100805643 101.679