Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03212 ATGAAATGGTCTGCTCATGTCATTTGCATCATTGTTGGTTCTTGGTCATATGTTCAGTTTCATTTGTCTTTGCATTTAATGCTTCTGTTTTCCTTAGGTAATTCGCATTTCATTGATGGCAGCTTGGAAAGGGATTCTAATAGCATACACCATGGACAAACAGCAACTGATATGAGCTTAAACAAGGGTGTGTTCGGAAAGCAAAGAATTTCAACAGAATCATCACGAGCATCATTCTCTTCTTGTTCATCATCAGTATCCTCTCTGGACTGTAAGGCTGAAGTAGAGGCTCCCTTTGACCGGATTATTTTTCCTGAAACTCCTTCAAGGGACACATTTATGAACCAACCAACCATCTCTCCCCATTTAGGACGTCACTCCCTTGACCTGAGGGATGTGGTGAAGGACTCTATGCATAGGGATGCTCGAGGACTGTCAGTGAAGACTACAGCCAAAGAGGAATCTGTCTTTTATGCTATGAAGCACAGAGATTCCCCAAGACCTCTTCAGCTGTCCAAATCTGTTGATGGTAACTATGGAGTTGGCATAGATGGAAAACAAAGTGTGCCTATTGATCTAAAGGAGTCTATCCGAGTCCTTGCTAAACTTAGAGAAGCACCTTGGTATTATGCAGAAACTAGAGAACTTCCAAGATCATCAAATGAAATAAAAGATGGACACTGGAATTCCATCTCAAAGGATGCTCCTTGGTTTGCTTATGATGGAAGAGAAACAAGCCGTCTATCTTTTGAATCAAGAGATACCATCAAATCCACACCAAAGATAAAAGAGCTTCCTAGACTTTCACTGGATAGTAAAGAAGGTTCATGGCGCAGTTATAGCTCTGATTCAAAACCCAGTCACCTCTCAAGAAATGTTTATAATGGCACATCCACTTCAAATGAAAAATTCTCTAGCCTACAACAGTCAACCCAGAGTCGGCCACCAAGTGTTGTGGCAAAATTAATGGGCTTGGAAACGTTACCGGATTCCTCATTGACTGGTGATACTCAATCAAGTTCAACTGAAACTTATTCAGCTCAAGTTAATGATCAGTTTCCAAGATCATCCAAAAGTGGATTCACCAGGCCACTCCGAGTTTCTAATTCTCCAAAAAGTTCATTGAAAGACCCAACTTCCCCAAGGCGGAAGAATCCTGATCTGGTTATGAAACCAATCTCAAGTTCAAGGTTTCCCATTGAACCAGCACCATGGAAGCAGCAGGACGCAAATCGAAGCTCTCAGAAACAAAGTTCAAGGGCCATAAATGCTCCAGCAAGAACATCAGATTCATTTCCTTCAGTTTATAGTGAGATAGAGAAGAGATTGAAGGATCTTGAATTCAAACAATCTGGAAGGGATCTCAGAGCACTAAAACAGATACTAGAGGCAATGCAAGAAAAGGGGCTGCTAGAGAGCAGAAAAGATGAACAAGGTCCAAATGTTGTTGTAAGTCAAAGTGACTATGAACCAAAAGCTGCCAATCTAATTCAAAATTCCAGGCCAGTAAGGCAACAAAATCCTCAGGGAAACAATTTTCCATCTTCCACAATCAAGGGATCTGACTCCGCAAGGACTTTTGAGTCCCCAATAGTGATAATGAAACCAGCAAAACTCGTTGAGAAGACTGGGATTTCTGCTTCATCAGTCATTCCAATTGGTGGCATTTCTAGTTCCCATAAACTCCAAAGTGGTGGTGTATATGTAGATAGTAAAAATGGCTCATCTTCTACTCGAGTAGTAAAAGATCAGTCTCCTAAAAACATTCGCCGGGATACTTCTGCAGGTTCCAATGATAAGAAAGCAATTAGTGCCAAGACTACAAGATCAGCACAATCTCATTCTAGGTCTCAACAACACCCAAGAGAAAATAGCCAAAATTCAGTAAAGCACTCGGGATCTGTGAGCCCAAGAATGCAACAGAAGAAGTTGGAGTTAGAGAAGCGCTCTCGTCCGCCTGCCTCACCAACAGATTCAAACAAACCTAGAAGGCAATCTGGTAAGAAGGCAACAGAATCAGGTTCCCCAGGTGGAAAACAAAGACCCAAAGTCCCCAACTTGCAGCATAGTGATGAGCAACTGAGTGGGATAAGCAGTGAATCAAAAAGTTTTAGTTACCAAGGAGATGAAATTTCTTTGCAATCAGATGGCATCACTGTCAACTCAATGATGGATATGGAAGTCTCCAGTAGTTTTCAATCTGCTGATATTAATGACAACCTAAGCCCATCCTTGAAGGCTATGAAGAAATTGGTTTCAGAAACATTGCAGAAAAACTCAACTCAAAGATTGGATGAGGATGAGGCAATTGCAGAACTTGCAACAGATGCCCCGGAACATCCAAGTCCTATCTCAGTTCTTGATGGCTCAGTGTATAGAGATGATCTGCCATCCCCAGTAAAGCAGATATCTGAAGATCCAAAAGCTGTTGATGCCCAAGAATGTAAAGAAAATGAGGTTAAAGATCAGTGGAACCCTGCAGATAGCCTTTCATTTAACAGCACAGGATCTGGAGAGATCAATCGCAAGAAACTACAGAACATAGATCACCTTGTTCAGAAGCTTAGACGGCTGAACTCCACTCATGATGAAGCTAGGATCGATTACATTGCTTCCCTATGTGAAAACACAAATCCAGACCACAGATACATATCTGAAATATTACTAGCTTCAGGTCTCCTACTTAGAGATCTGGGTTCTGAATTGCTGACATTTCAACTTCACTCATCAGGTCATCCCATTAACCCTGAGTTATTCCTTGTCTTGGAGCAAACCAAGGCAAGTAGTTTGCTTTCAAAAGAAGAAAGCAGCCCTGGAAAAGTTGTCCACAAGAAGCTAAATACAGAGAAATTTCACAGGAAACTTATCTTTGATGCTGTGAATGAAATTCTTGGTGCAAAATTAGGCTCCTCCCCTGAGCCATGGTTTCAGCCTAACTGCAACAGACTCACAAAGAAAACCCTCAGTGCTCAAAAGCTTCTTAAAGAACTATGCTTTGAGATAGAAAAAATGCAAGCCAAGAAGCCAGAATGCTGCTGCTTAGAAGGTGAAGAGGATGATGGTCTGAAAAGTGTACTATGGGAAGATGTGATGCATGGCTCAGAAAGTTGGACAAACTTCCATGGTGAAATTCCTGGGGTTGTGTTGGATGTTGAGAGACTGATATTTAAGGACTTAGTAGATGAGATTGTGATTGGTGGAGCAACTGGTGTGCGAGTCAAGTCATCTGTTAGGCGCAGGAAACTATTTGGAAAGTAG 3258 0.4165 MKWSAHVICIIVGSWSYVQFHLSLHLMLLFSLGNSHFIDGSLERDSNSIHHGQTATDMSLNKGVFGKQRISTESSRASFSSCSSSVSSLDCKAEVEAPFDRIIFPETPSRDTFMNQPTISPHLGRHSLDLRDVVKDSMHRDARGLSVKTTAKEESVFYAMKHRDSPRPLQLSKSVDGNYGVGIDGKQSVPIDLKESIRVLAKLREAPWYYAETRELPRSSNEIKDGHWNSISKDAPWFAYDGRETSRLSFESRDTIKSTPKIKELPRLSLDSKEGSWRSYSSDSKPSHLSRNVYNGTSTSNEKFSSLQQSTQSRPPSVVAKLMGLETLPDSSLTGDTQSSSTETYSAQVNDQFPRSSKSGFTRPLRVSNSPKSSLKDPTSPRRKNPDLVMKPISSSRFPIEPAPWKQQDANRSSQKQSSRAINAPARTSDSFPSVYSEIEKRLKDLEFKQSGRDLRALKQILEAMQEKGLLESRKDEQGPNVVVSQSDYEPKAANLIQNSRPVRQQNPQGNNFPSSTIKGSDSARTFESPIVIMKPAKLVEKTGISASSVIPIGGISSSHKLQSGGVYVDSKNGSSSTRVVKDQSPKNIRRDTSAGSNDKKAISAKTTRSAQSHSRSQQHPRENSQNSVKHSGSVSPRMQQKKLELEKRSRPPASPTDSNKPRRQSGKKATESGSPGGKQRPKVPNLQHSDEQLSGISSESKSFSYQGDEISLQSDGITVNSMMDMEVSSSFQSADINDNLSPSLKAMKKLVSETLQKNSTQRLDEDEAIAELATDAPEHPSPISVLDGSVYRDDLPSPVKQISEDPKAVDAQECKENEVKDQWNPADSLSFNSTGSGEINRKKLQNIDHLVQKLRRLNSTHDEARIDYIASLCENTNPDHRYISEILLASGLLLRDLGSELLTFQLHSSGHPINPELFLVLEQTKASSLLSKEESSPGKVVHKKLNTEKFHRKLIFDAVNEILGAKLGSSPEPWFQPNCNRLTKKTLSAQKLLKELCFEIEKMQAKKPECCCLEGEEDDGLKSVLWEDVMHGSESWTNFHGEIPGVVLDVERLIFKDLVDEIVIGGATGVRVKSSVRRRKLFGK. 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03212 1085 MobiDBLite consensus disorder prediction 407 433 - -
Seca3g03212 1085 Pfam Domain of unknown function (DUF4378) 880 1062 IPR025486 -
Seca3g03212 1085 MobiDBLite consensus disorder prediction 499 522 - -
Seca3g03212 1085 MobiDBLite consensus disorder prediction 687 709 - -
Seca3g03212 1085 Coils Coil 848 868 - -
Seca3g03212 1085 MobiDBLite consensus disorder prediction 553 583 - -
Seca3g03212 1085 MobiDBLite consensus disorder prediction 328 433 - -
Seca3g03212 1085 PANTHER LONGIFOLIA PROTEIN 41 1083 IPR033334 GO:0051513
Seca3g03212 1085 MobiDBLite consensus disorder prediction 553 709 - -
Seca3g03212 1085 MobiDBLite consensus disorder prediction 274 316 - -
Seca3g03212 1085 Pfam DUF761-associated sequence motif 309 332 IPR032795 -
Seca3g03212 1085 MobiDBLite consensus disorder prediction 598 639 - -
Seca3g03212 1085 MobiDBLite consensus disorder prediction 330 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03212 Seca-Chr3 57837371 57842007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03212 122 1084 TRM (TON1 Recruiting Motif) Superfamily AT1G74160 48.629 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03212 - - gmx:100787391 1614.74