Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03208 ATGCTTAATGTTCATTGTAATTATTCTTATTGCATTGAAGCGGGAAATGAAGAACAAACAGAGGGAAGAGGAAAGGAAGCGCAAGGAGGAGGAGAAGGCCAAATAGGGGAACCTGAATTGAATAATTGTTGTGTGGAAGATGGGATATTTTTTTTGGTGAATTTTCTGGAGTCATGCCCTTCTGTAAAGTATAGTGTCTGGATTGGAAGATCAATCCTTGCATCCCTCAGCACCTTCCCTCAGATGTGGATATCTAAGGCTGAAGAATGA 270 0.4074 MLNVHCNYSYCIEAGNEEQTEGRGKEAQGGGEGQIGEPELNNCCVEDGIFFLVNFLESCPSVKYSVWIGRSILASLSTFPQMWISKAEE. 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03208 89 Pfam Actin 62 88 IPR004000 -
Seca3g03208 89 Gene3D - 49 89 - -
Seca3g03208 89 SUPERFAMILY Actin-like ATPase domain 60 88 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03208 Seca-Chr3 57782510 57785726 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03208 60 88 Cytoskeleton Gene Families AT1G49240 86.207 5.33e-11 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03208 K10355 - ncol:116246917 52.373