Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Seca3g03151 | ATGGAAATAACGGAAGAACAGAGAAAACGAGCCGAAGCGAACCGTGCAGCAGCCATCGCAAAACGGAAAGCCTTATTGGAATCCACCGCCGCTCAGCAGCAACAACAACCTCAAGGACACCCCTGGCACCTTTTCAAGTGCCAAAAGATCACCCACCCTCCCAAACCCCAACCCCAACACCACAAGTTCCTCGCCAGGCTCGAAATTTGCTCCCCCGATTCCTTCTCCGTCACCCCTCTCCCCCTTCCCGAATTCCCCTTCCCCGCCCCACACATTTGCTTCGACATTCTCAATTCCATTCTCTCCCACGTGGTTCCCTCGCACTTCACGCAGACCAGCGGGGGCGGGAATGCCTGCGTGTTCAAGCTTTCGGACTACAACGCCGTCCTCAAGCGGTTGAAGGCCGCGACGGATATACAGGTGGAGGAGATTCCTTGGGGGACGTTCAATGTGGTCGAGAGGCTCTCCCATTCCTTCGCGGCGGGGCGGTGGGCGCCGTTGAGGCCTGAGCACTTGAGTGATGAGGAGGTTGACCGCTTGATCGGGAAGCTTCCAAGGACTCTCCTTGATAGGTTGCTCCCTTTCCAAATGGATGGCTTACGGTTTTCCCTCAGAAGGGGTGGCCGCTGCCTCATTGCTGATGACATGGGCCTTGGAAAAACACTACAGGCTATTGCTATTGCGGGATGTTTCTTGGATGAAGGGTCTATACTTGTTGTTTGCCCTGCTGTTTTGCGGTTTTCATGGGCGGAAGAATTGGAGCGTTGGCTTCCTTTCTGCTTGCCTGCTGATATCCATCTAGTTTTTGGCCATCAAGATAATCCGGTATATTTAACAAGATTCCCTAAAGTAGTGGTTATTTCTTATACCATGCTCCATCGTCTTAGGAAGAGCATGCTTGAGCGTGAGTGGGCTCTTCTGATTGTTGATGAATCTCATCATGTGCGATGTACAAAGAAAGCCTCGGAACCAGGAGAGATAAAGGCTGTTCTTGACGTGGCTTCAAAAGTCGGGCGTATAATTTTGCTATCAGGGACACCTTCTTTGTCAAGACCGTATGACATATTTCATCAGATAAATATGTTGTGGCCGGGTTTGCTGGGGAAGACTAAATACGAGTTTGCAAAAACTTATTGTGATTTGAAATATATTAAGGGCATCCAAGGAAAATATTTTGCGGATTATTCAAAGGGCATTCGCTTGGAGGAGTTGAATGTGTTACTGAAGCAAACTGTTATGATAAGGCGTCTGAAAGAGCATGTGTTGCAACAGTTACCTCCAAAACGCCGGCAAATTATAAGACTGTTGTTGAAGAGATCAGATATAGTTGCTGCAAAAAACGCAGTTGCGGTATTGAAGATTGATGCCTCTGAAAATGCAAATGAAGATATGCCTTTGGAAAATTTGGATGAACATGATGGAAAGCTTTCTTATCAGGAACTTGGTATTGCAAAGCTTTCTGGGTTTTGCGAATGGCTTTCCCTCCACCCACTCATTGCAGGATCAGAGAATGCTTCAAAGATGATAATTTTTGGTCATCACCACAAAGTTCTTGATGGAGTACAGGAGTTTATATGTGAGAAAGGAATAAATTTTGTGCGGATTGATGGAAATACTCTTCCAAGAGATAGACAATCAGCCGTAGTCTCATTTCGATCAACACCAGAGGTTAAAATTGCGATAATAGGTATTATGGCAGCAGGTTTTGGACTTGATTTCTCGACAGCACAAGATGTTGTATTCTTGGAGCTACCTCAGTGCCCAACTGTGATGCTTCAGGCTGAGGATAGAGCTCATCGACGGGGGCAAACAAATGCAGTTAATGTATACATATTCTGTGCAAAGGATACCTTGGATGAATCCCATTGGAAAAATTTGAACAAAAGTTTGCACCGTGTTTCATGTACAACAGATGGCAAATATGATTCAATGAAAGAGATAGAGGTTGAAGGTGTTTCTTATTTAGACGCATCATTGGAAACTGACAGTTATGAAGAGCAATCTGCATGTAAAGATGCATCAAGGGGAACACAATTGGATAAGCAATCTTCTGCAGTAAATTCAAATGAATTAGAAGCAAATCAAAATGATAAATTTGATGAGTGGACTTCTTTTGTACATAACACAATTCAGGGTGCTAATGTTATGATGGATAAGGTTGACTGCCTAGATTCAGGCAAGGCTTCAGTTTTGGATGGAAATCTTGATGTAGATGCTTTTGATGCTGAGGAGATATGTTCCGGAAAGAGCTTTGAAGACAAAGATAAAGTAATAGAGGATAAGAAATCAATTTCAACAACAGATGCAGATGACAACCAGCCTGTTCATGCAGTTGAAGCTGATGGACATTGCTCTAATCAAGTTGATTCTCTTAGATTTGAGGAAAAGAAATCATTTTCAACAACAGATGCAGATGAAAACCAGCCTGTTCATCCAGTTGAAGCTGATGGTCATTGCTCTAAATCTAATCAAGTTGATTCTCTTAGATTTGAGGTGAGCCCATACACTGGAAGGATCCACTTGTATACTTGCATTTTGGGTACAGATACAAGACCACAGCCACTTTATGAAAATTTCCGACCAGAAGAACTTGAGTTGCTAAGTTCTGCTGCTGCTGATGAGAAACAGAATATAGAGTCTGTGTCTGTCAAGGATAACCCTGCTTATAGGCATGCTCTTCTGAACTTTTCAAATGAGTGGAAGAATTTGAGGTCAATTGAACGCAAGAAGTTACTTGGAAAACCATTACAACTTCCTTTGGCTGTTGAACTGTGCTACTTGAGTGAAAGCAATAACCACAACAACAAGGGATTATTAAATGGTGGAAGTAAACGACGCATGACACCTTTAGTGGAGATTAGCTATCCATTACCATCCGATGCTGTTTGGAGAAAGGTTTATCTCCGAAGTGGCCTCGGTAAGAAGGAAAAAGAATACACTCAAGGCTGGAGCCTGAAAGATGAGCCTCTTTGTAAGCTTTGTCAAAAGCAGTGCCTGGGTAACAATGCCAAGACACCTGAATATTTTGAAGATCTATTTTGTAACCTTGTATGCTATGAAGAGTATCGCATGAGAACTAGCAACAGATTTCTCCGTCAGGAACTTTTCCAAATTGAACAAGGTGTGTGCACAAATTGCCAATTGGACTGTCATAAGCTTGTTGAGCATATAAGACCTTTGTCATTGGAAAGACGACGGGAGTATGTTGAGAAAGTAGCACCAAAAATTGCAAAGCGGAAGAACATGCTTGAGAGACTTGTCAACGATCCAACTGAAGGCAATTCATGGCATGCTGATCATATTGTTCCAGTATATCAAGGCGGAGGTGAGTGCAAACTGGAGAACATGAGAACTCTTTGTGTGGCTTGCCATTATGATGTCACTGCTGCACAGTGTGCTGAACGACGCACAATAAGAGCAAATGCCAGGAAACAACTAAAAGCGTTAATGAATAGCATGAAAAATGGTTTGAAGGGTGCTGCTGGCACTACTATTAAGGACCATGGGCTTCCCGAGGTACAAGGGAGTTTGATTGAGGATGAGCTTTTAGTCAAGGTTCCTGGAAGTGCATATTCTCTAGCTAACAACTAA | 3591 | 0.435 | MEITEEQRKRAEANRAAAIAKRKALLESTAAQQQQQPQGHPWHLFKCQKITHPPKPQPQHHKFLARLEICSPDSFSVTPLPLPEFPFPAPHICFDILNSILSHVVPSHFTQTSGGGNACVFKLSDYNAVLKRLKAATDIQVEEIPWGTFNVVERLSHSFAAGRWAPLRPEHLSDEEVDRLIGKLPRTLLDRLLPFQMDGLRFSLRRGGRCLIADDMGLGKTLQAIAIAGCFLDEGSILVVCPAVLRFSWAEELERWLPFCLPADIHLVFGHQDNPVYLTRFPKVVVISYTMLHRLRKSMLEREWALLIVDESHHVRCTKKASEPGEIKAVLDVASKVGRIILLSGTPSLSRPYDIFHQINMLWPGLLGKTKYEFAKTYCDLKYIKGIQGKYFADYSKGIRLEELNVLLKQTVMIRRLKEHVLQQLPPKRRQIIRLLLKRSDIVAAKNAVAVLKIDASENANEDMPLENLDEHDGKLSYQELGIAKLSGFCEWLSLHPLIAGSENASKMIIFGHHHKVLDGVQEFICEKGINFVRIDGNTLPRDRQSAVVSFRSTPEVKIAIIGIMAAGFGLDFSTAQDVVFLELPQCPTVMLQAEDRAHRRGQTNAVNVYIFCAKDTLDESHWKNLNKSLHRVSCTTDGKYDSMKEIEVEGVSYLDASLETDSYEEQSACKDASRGTQLDKQSSAVNSNELEANQNDKFDEWTSFVHNTIQGANVMMDKVDCLDSGKASVLDGNLDVDAFDAEEICSGKSFEDKDKVIEDKKSISTTDADDNQPVHAVEADGHCSNQVDSLRFEEKKSFSTTDADENQPVHPVEADGHCSKSNQVDSLRFEVSPYTGRIHLYTCILGTDTRPQPLYENFRPEELELLSSAAADEKQNIESVSVKDNPAYRHALLNFSNEWKNLRSIERKKLLGKPLQLPLAVELCYLSESNNHNNKGLLNGGSKRRMTPLVEISYPLPSDAVWRKVYLRSGLGKKEKEYTQGWSLKDEPLCKLCQKQCLGNNAKTPEYFEDLFCNLVCYEEYRMRTSNRFLRQELFQIEQGVCTNCQLDCHKLVEHIRPLSLERRREYVEKVAPKIAKRKNMLERLVNDPTEGNSWHADHIVPVYQGGGECKLENMRTLCVACHYDVTAAQCAERRTIRANARKQLKALMNSMKNGLKGAAGTTIKDHGLPEVQGSLIEDELLVKVPGSAYSLANN. | 1197 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Seca3g03151 | 1196 | Pfam | SNF2-related domain | 210 | 446 | IPR000330 | GO:0005524|GO:0140658 | |
| Seca3g03151 | 1196 | Pfam | Helicase conserved C-terminal domain | 500 | 602 | IPR001650 | - | |
| Seca3g03151 | 1196 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 201 | 365 | IPR014001 | - | |
| Seca3g03151 | 1196 | SMART | HNH_5 | 1077 | 1125 | IPR003615 | - | |
| Seca3g03151 | 1196 | CDD | HNHc | 1088 | 1128 | IPR003615 | - | |
| Seca3g03151 | 1196 | MobiDBLite | consensus disorder prediction | 798 | 819 | - | - | |
| Seca3g03151 | 1196 | Pfam | HNH endonuclease | 1094 | 1125 | IPR002711 | GO:0003676|GO:0004519|GO:0008270 | |
| Seca3g03151 | 1196 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 494 | 648 | IPR001650 | - | |
| Seca3g03151 | 1196 | SMART | helicmild6 | 519 | 602 | IPR001650 | - | |
| Seca3g03151 | 1196 | SMART | ultradead3 | 188 | 384 | IPR014001 | - |
Showing 1 to 10 of 19 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Seca3g03151 | K25861 | - | gmx:100788690 | 1820.44 |
Showing 1 to 1 of 1 entries