Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03138 ATGGCGCTGTTCCGAAGGTTCTTCTACCGGAAGCCGCCGGATCGCCTTCTCGAGATCTCTGAGAGAGTTTATGTTTTTGATTGTTGCTTCTCCACGGATGTCTTGGACGAAGATGAGTACAAAGTTTATATTGGGGGCATTGTAACTCAGCTACAAGATCACTTTCCAGATGCTTCTTTCATGGTATTCAATTTCAGAGAAGGGGATAGGCGCAGCCAAGTTTCAGACATACTGTCTCAGTATGACATGACAGTTATGGAGTACCCTCGGCAATATGAGGGTTGTCCACTTCTGCCTTTGGAGATGATTCATCACTTCCTTCGATCAAGTGAAAGCTGGCTGTCTTTGGAGGGGCAACAAAATGTGCTTTTGATGCACTGTGAAAGGGGGGGTTGGCCTGTGCTGGCATTTATGCTAGCTGGTCTTTTATTGTACCGGAAACAATACACTGGGGAGCAGAAGACTCTTGAAATGGTCTACAAACAAGCGCCCAGAGAACTTCTCCACCTTTTATCTCCTTTGAACCCACAGCCTTCTCAGTTAAGATATCTCCAGTATATTTCCAGGAGACATTTGGGTTCTGAGTGGCCTCCATCAGAAACACCCTTATATTTGGATTGTCTGATTCTTGGAGTCCTTCCTTTATATGATGGTGGAAAAGGATGCAGGCCTGTTGTACGTGTTTATGGTCCGGACCCTTCAAAACCTGTCAATAGAAGTTCTAAGCTTCTTTTCTCAACTTCAAAAACCCAAAAACATGTTCGCCACTACCAACAGGCAGAATGTATGCTCGTAAAAATTGATATCCATTGTCGTGTTCAAGGGGATGTCGTTCTTGAATGCATACATTTAAGTGAAGATTTGGTTCGTGAGGAGATGATGTTTAGAGTCATGTTTCATACTGCATTCGTACGGTCAAATATTTTGTTGCTGAGCCGTGATGAAATCGATATTTTGTGGGATGCAAAGGATCAGTTTTCCAAGGATTTTAAATCTGAGGTGCTCTTTTTGGACGCTGATGCTGTTATACCCAACCTAGCCACAGTCATTGTAAGTGGAGATGCAAATGAGACAGAAAGTGCTTCACCTGAGGAATTCTATGAAGCGGAAGAGATCTTCAGCAATGTAATTGATACACAGGAAGGTAAGGGGGATTATGATTCTACAATGGTTCATGACAATGCAGTAGATGATGGAAGTCATAAAGAGGTCTGGAAAGAGTATTCAGATCCTAATACTTTTCAGGATTCCACGCCAGATGATGGGATTCACCAACAGGTGGGAAGGACAGACTGTGGTATTAATGCAGTAAAAGACATTACTGTTGATGATGTGAAGTACAAGCTCAATGAGAGTGTGGATTCAGATACTCATGAAGTCAAAGATATTGTTGTGGATGATGGAGAAAATAAGTTAACTCCCTCTGCAGACACTTCTGATGTGATGAAAACCCAGGAGACAAAGGAAGTCACTATGGATGTGCATGATGAGTTGGCAGCTATGCAAAACATGTATGATGAAGATAACAATGCAGCACAGGAAGAATTAGAGTCTGAGGAAGGGGAGCTGGTGCATGATCTTTCCATATCAAAATCTGATAAACTACTACCATCTGCTGAAAAGAAACAACATCCTTCAAACTCAAAGCCAATGGGGGATACAGTTGCAGCAAAGCAAAAAACTAAACACCAAGAACCACATGGTTTTCAAGCAAAACTAGCAAAACCAAATGCAACAACTAGGTGGATACCTTCTAACAAGGGTTCTTATCAAGATTCAATGCATATCTCATATCCACCAACAAGGCATAATGATGCACCAACTGCTCTGTCAAATGCTACCTCTGCAAAGGAGAAAATGACCGATGCCAAAGGAATACATGACTTAAATTGTAACGGGGACAATTCAACATCTTCAGACAGCATGACAGAAACTGACTCAAACTCGCCACGATCATCATTACTATCTGTTAATGACACATCTCTTCAGTCAGCTACCCAAGCACCACAACTGAGCTCCAATCAAGTGCTACAACCTTCTCCTCCCCCTCCCCCTCCCCCTCCCCCTCCACCCAAATGGCCATCTTCTTCCTTGGATGGTAAGGTATCTACAATACCGCCACCACCGCCACCACCTTCCTTGACATTATTTAGCAAGCAAAACAAAGGGATGAACTTACAAGCTGCGATTGCTCCACTTCCTCCTCCCCCTCCCCCTCCACCTCCATTCATTGGGAAAAATAAAGGTAGCAACTTACCTCCTACCTATTGGAAGTCTGTTTATTCATCAATTGCTGTAGTTGGAGAGAAAAGTGGTGCTTTACCTCCTACTTTAGATCCTCCTATTGCAAGAAGTGCAATTATGACAAAAGTTTCCGAATCACTCGATGTAGTTTCCCTTGCATGTCCTCCTCCTCCTCCTCTAAAGTATGTAGTTACATCCATTCCTCCTCATCTGCCACCTCCCCCTATATCTTCTACAGATAGAGCTCCACTCCTTTCTCCCTCAACACCCCCAACATCACTTAAAGCTCCACTTCCTCCACCTCCACCACCGCCACCCCCTCCTCCTTTATGTAGAGTTCCATCACCATCACCACCACCACCACCTCCACAACCTATAAGTAAATCTCCACCACCACCGCCGCCGCCGCCACTGCATCCTCCTCCTTTATGTAGAGCTCCACCACCACCTCCACCTCCTTTTAGTAGCGCTTTGGCACCACCACCTCCACCTCCACTTCCATCTCCACCTCCTTTTAGTACAGCTCCGTCACCATCACCTCCACCTCCACCTCCTTTTAGTAGAGCTCCACTACCACCACCACCACCTCCACCTCCTTTTAGTACAGTTCCATCACCGCCTACTCCACCTTCTTTTAGTATAGTTCCATTACCACCACCTCCACCTCCTTTTAGTAGAGCTCTACCACCATCACCTCCACCTCCACCTCCACCGCTTCCACCTCACTTTAGTACAGCTCCATTACCACCACTTCTACCTCCTTTTAATAAAGCTCCACCACCATCACCACCACCACCACCTCCCTTTAGTACAGCTCCATTACCACCTCCTCCACCACCACTTCTTCCTCCATCAAGTGGAGCACCACCTCCACCACCACCACCACCTCATCCTCCATCAACTGGAGCATCGCCACCACCACCTCCACCTCCAGCTCCTCTTCTTCCATCAAGTGGAGCACCACCTCCACCACCACCACCACCTTTTCCTCCATCAAGTGGAGCTCCACCACCACCACCACCTATTCCTACACTAAGTGGTGCACCACCTCCACCACCTCTTCCTATGTCAAGTGGAGCTCCACCACCACCACCACCTATTCCTACATCAAGTGGAGCACCACCACCTCTTCCTATATCAAGTGGAGCTCCACCCCTACCCCCACCCCCACCATTTATTCCTACATCAAGTGGAGTACCACCTCCACCACCGCCTCCACCTTTTCTTCCATCAAGTGGAGCTCCACCTCCACCACCACCTCCTTCAATAATGTCTAGAGCCCCACCTCCCCCACCTCCCCCATCTCGTGGAGCTCCGCCACCACCTCCAATGTATGGAGCACCCCCGCCACCACCACCTCCAATGCGTGGAGCTCCACCTCCACCTCCACCGGCTCCAGGGTGTGGAGCACCACCTCCACCACCACCTCCACCTTTTCTTCCATCAAGTGGAGCTCCACCTCCACCACCACTTCCTTCAATGTCTAGAGCCCCACCTCCCCCACCACCTCCAATGTATGGAGCACCCCCGCCACCACCACCTCCAATGCGCGGAGCTCCACCTCCACCTCCACCGGCTCCAGGGTGTGGAGCACCACCTCCTCCACCACCTCCAGGCGGCAGAGGCCCACCTCCACCACCTCCTCCTGGAGCTCGTCCTCCCGGTGCTCCTGCTCCTCCTGGACCTCCAGGTGGTGCACCTCCACCACCTCCTCCCTTAGGCTCCAAAGGTGCAGTTGGAGCCGATCCAAGAGGGAGAGGGCGTGGACTTGCACGCCTTCCAGGTGCTGGTGCAGCGGCAACTAGACGATCCTCCTTAAAGCCTTTGCATTGGAGTAAGGTAACAAGGGCATTGCAAGGAAGTTTATGGGAAGAATTACAAAGACATGGAGAACCTCAAATTGCACAAGAGTTCGACGTTTCAGAATTAGAGAAGCTCTTTTCTGCAAATGTTCCAAAACCTGCTGATTCTGGTGGTAAATCTGGAGGGCAGCGCAAATCTGCTGGATCCAAAACTGACAAAGTCCACTTGATTGACCTAAGGAGAGCCAATAATACTGAAATTATGCTTACAAAGGTTAAGATGCCACTTCCTGATATGATGGCTGCAGTATTGGCTATGGACGAGTCGGTATTAGATGTTGATCAGGTGGAAAATCTCATTAAATTTTGTCCTACCAAAGAGGAGATGGAACTTTTGAAGGGATACACTGGTGACAAGGAGAAATTGGGAAAGTGCGAACAGTATTTTTTGGAGCAGATGAAAGTGCCACGAGTGGAGTCAAAATTAAGAGTATTCTCTTTTAAGATTCAGTTTGGGACTCAGATTAAAGAGTTCAAGAAGAGTTTAAACACGGTGAACTCTGCCTGTGATGAGGTCCGAAATTCGCTCAAACTGAAGGAGATTATGAAGAAAATTCTTTATTTGGGCAATACATTGAATCAAGGAACAGCAAGGGGATCTGCTGTTGGATTTAAGTTGGATAGTCTTTTAAAGCTCACTGACACCCGTGCTTCTAACAGTAAAATGACTCTGATGCATTATCTTTGCAAGGTCCTAGCTGAAAAGTCTCCTGCACTCCTTGACTTTCACCTTGACCTTGTTAGCCTGGAAGCAGCCACTAAGATTCAATTGAAGTCATTAGCAGAAGAAATGCAGGCAATCATTAAGGGATTAGAAAAGGTTAAACAGGAGTTTGCTGCATCTGAAAATGATGGTCCTGTATCCGAAGTTTTTCGTAAGACATTGAAAGAAATCATTGCTGTAGCTGAATCAGAGGGGGCATCTTTAACAAACCTATATTCTGTGGTGGGTAGAAATGCAGATGCACTTGCACAATATTTTGGTGAGGATCCTGCCCGTTGTCCATTTGAGCAAGTTACTACAACTATTCTAAATTTTTTACGGTTGTTTCGCAAAGCACATGAAGAGAATTGCAAACAAGCAGAGTTGGAGAAGAAGAAAGCAGAGAAAGAGGCTGAAATGGAGAAGGCTAAAGGAAGCAGCTTGACAAGGAAAAGTGAAAAAGATAAAGAAGAAGAAAGCTGA 5292 0.4684 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDVLDEDEYKVYIGGIVTQLQDHFPDASFMVFNFREGDRRSQVSDILSQYDMTVMEYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYTGEQKTLEMVYKQAPRELLHLLSPLNPQPSQLRYLQYISRRHLGSEWPPSETPLYLDCLILGVLPLYDGGKGCRPVVRVYGPDPSKPVNRSSKLLFSTSKTQKHVRHYQQAECMLVKIDIHCRVQGDVVLECIHLSEDLVREEMMFRVMFHTAFVRSNILLLSRDEIDILWDAKDQFSKDFKSEVLFLDADAVIPNLATVIVSGDANETESASPEEFYEAEEIFSNVIDTQEGKGDYDSTMVHDNAVDDGSHKEVWKEYSDPNTFQDSTPDDGIHQQVGRTDCGINAVKDITVDDVKYKLNESVDSDTHEVKDIVVDDGENKLTPSADTSDVMKTQETKEVTMDVHDELAAMQNMYDEDNNAAQEELESEEGELVHDLSISKSDKLLPSAEKKQHPSNSKPMGDTVAAKQKTKHQEPHGFQAKLAKPNATTRWIPSNKGSYQDSMHISYPPTRHNDAPTALSNATSAKEKMTDAKGIHDLNCNGDNSTSSDSMTETDSNSPRSSLLSVNDTSLQSATQAPQLSSNQVLQPSPPPPPPPPPPPKWPSSSLDGKVSTIPPPPPPPSLTLFSKQNKGMNLQAAIAPLPPPPPPPPPFIGKNKGSNLPPTYWKSVYSSIAVVGEKSGALPPTLDPPIARSAIMTKVSESLDVVSLACPPPPPLKYVVTSIPPHLPPPPISSTDRAPLLSPSTPPTSLKAPLPPPPPPPPPPPLCRVPSPSPPPPPPQPISKSPPPPPPPPLHPPPLCRAPPPPPPPFSSALAPPPPPPLPSPPPFSTAPSPSPPPPPPFSRAPLPPPPPPPPFSTVPSPPTPPSFSIVPLPPPPPPFSRALPPSPPPPPPPLPPHFSTAPLPPLLPPFNKAPPPSPPPPPPFSTAPLPPPPPPLLPPSSGAPPPPPPPPHPPSTGASPPPPPPPAPLLPSSGAPPPPPPPPFPPSSGAPPPPPPIPTLSGAPPPPPLPMSSGAPPPPPPIPTSSGAPPPLPISSGAPPLPPPPPFIPTSSGVPPPPPPPPFLPSSGAPPPPPPPSIMSRAPPPPPPPSRGAPPPPPMYGAPPPPPPPMRGAPPPPPPAPGCGAPPPPPPPPFLPSSGAPPPPPLPSMSRAPPPPPPPMYGAPPPPPPPMRGAPPPPPPAPGCGAPPPPPPPGGRGPPPPPPPGARPPGAPAPPGPPGGAPPPPPPLGSKGAVGADPRGRGRGLARLPGAGAAATRRSSLKPLHWSKVTRALQGSLWEELQRHGEPQIAQEFDVSELEKLFSANVPKPADSGGKSGGQRKSAGSKTDKVHLIDLRRANNTEIMLTKVKMPLPDMMAAVLAMDESVLDVDQVENLIKFCPTKEEMELLKGYTGDKEKLGKCEQYFLEQMKVPRVESKLRVFSFKIQFGTQIKEFKKSLNTVNSACDEVRNSLKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNSKMTLMHYLCKVLAEKSPALLDFHLDLVSLEAATKIQLKSLAEEMQAIIKGLEKVKQEFAASENDGPVSEVFRKTLKEIIAVAESEGASLTNLYSVVGRNADALAQYFGEDPARCPFEQVTTTILNFLRLFRKAHEENCKQAELEKKKAEKEAEMEKAKGSSLTRKSEKDKEEES. 1764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03138 1763 Coils Coil 1626 1646 - -
Seca3g03138 1763 Pfam C2 domain of PTEN tumour-suppressor protein 199 336 IPR014020 -
Seca3g03138 1763 MobiDBLite consensus disorder prediction 1398 1422 - -
Seca3g03138 1763 SMART it6_source 644 1763 IPR015425 -
Seca3g03138 1763 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Seca3g03138 1763 MobiDBLite consensus disorder prediction 811 828 - -
Seca3g03138 1763 MobiDBLite consensus disorder prediction 579 618 - -
Seca3g03138 1763 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Seca3g03138 1763 MobiDBLite consensus disorder prediction 530 748 - -
Seca3g03138 1763 MobiDBLite consensus disorder prediction 676 695 - -
Seca3g03138 1763 Gene3D - 205 336 - -
Seca3g03138 1763 Coils Coil 1720 1749 - -
Seca3g03138 1763 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Seca3g03138 1763 PANTHER FORMIN-J 1246 1747 - -
Seca3g03138 1763 MobiDBLite consensus disorder prediction 730 747 - -
Seca3g03138 1763 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
Seca3g03138 1763 MobiDBLite consensus disorder prediction 630 675 - -
Seca3g03138 1763 MobiDBLite consensus disorder prediction 811 1352 - -
Seca3g03138 1763 Pfam Formin Homology 2 Domain 1350 1719 IPR015425 -
Seca3g03138 1763 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1421 1748 - -
Seca3g03138 1763 Coils Coil 502 522 - -
Seca3g03138 1763 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1344 1745 IPR015425 -
Seca3g03138 1763 SMART PTEN_C2_2 198 1397 IPR014020 -
Seca3g03138 1763 MobiDBLite consensus disorder prediction 838 1324 - -
Seca3g03138 1763 CDD PTP_PTEN-like 16 190 - -
Seca3g03138 1763 MobiDBLite consensus disorder prediction 1730 1763 - -
Seca3g03138 1763 Gene3D Formin, FH2 domain 1345 1731 IPR042201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03138 Seca-Chr3 56382912 56398704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03138 1 626 FH2 protein (formin) Gene Family AT5G07740 63.796 0.0 805
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03138 - - lang:109327684 1118.22