Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03096 ATGGCAGAGCAAAGCAAGGTGATCCTACATGGGATGTGGGCTAGCCCTTATGCCAAGAGGGTGGAATTGGCCCTTGAACTCAAGGGCATACCTTACGAGTATGTGGAAGAAGATTTAGCAAACAAAAGTGATTTACTTGTCAAGTACAACCCTGTTTACAAGAAGGTTCCTGTACTTGTTCATAATGGAAAGGCCATAGCTGAGTCACTTGTTATCCTTGAGTATATTCACGAAACCTGGAAAGATGGTCCTAAACTGCTTCCTGATGATCCCTACAAGAGATCCCAAGTGCGCTTCTGGTCTAATTTCATCCAGGATCAGCAGCTATTTGAGACCACTTTTCTAGTATTCAAAACTGAAGGAGAAGCGCAACAAAAAGCCGTTGACAAAGTGTATGAGAAACTGAATCTGCTTGAAGATGGAATGAAGACATTTTTCGTGGATGGCAATCCTGGTGTTAACGAAAACAATGCTGGAATTCTAGACATTGTGTTTTGTTCGTTATTTGGCGCTTACAAGGCTCAGGAAGAGGTTATTGGTTTGAAGTTGATAGTGGCAGAGAAGTTTCCTGTGTTATATTCTTGGCTGATGACTCTTGTTGAGCTCCAAGCGGTGAAAAAGGCAGCTCCTCCACATGATAAAGCAGTGGGACTTCTTCAGCGTTTTCGGCAGAATGCACTAGAATCTTCTACTGCTGCTTGA 702 0.4302 MAEQSKVILHGMWASPYAKRVELALELKGIPYEYVEEDLANKSDLLVKYNPVYKKVPVLVHNGKAIAESLVILEYIHETWKDGPKLLPDDPYKRSQVRFWSNFIQDQQLFETTFLVFKTEGEAQQKAVDKVYEKLNLLEDGMKTFFVDGNPGVNENNAGILDIVFCSLFGAYKAQEEVIGLKLIVAEKFPVLYSWLMTLVELQAVKKAAPPHDKAVGLLQRFRQNALESSTAA. 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03096 233 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 215 IPR045073 -
Seca3g03096 233 SFLD Main (cytGST) 4 230 - -
Seca3g03096 233 CDD GST_C_Tau 91 222 IPR045074 GO:0004364|GO:0006749
Seca3g03096 233 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Seca3g03096 233 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 227 IPR010987 -
Seca3g03096 233 SUPERFAMILY GST C-terminal domain-like 78 224 IPR036282 -
Seca3g03096 233 SFLD Main.3: Omega- and Tau-like 4 230 IPR045073 -
Seca3g03096 233 SUPERFAMILY Thioredoxin-like 6 106 IPR036249 -
Seca3g03096 233 FunFam Glutathione S-transferase U9 87 229 - -
Seca3g03096 233 ProSiteProfiles Glutaredoxin domain profile. 1 94 - -
Seca3g03096 233 Gene3D - 87 230 - -
Seca3g03096 233 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
Seca3g03096 233 Gene3D Glutaredoxin 1 86 - -
Seca3g03096 233 CDD GST_N_Tau 7 80 - -
Seca3g03096 233 FunFam Glutathione S-transferase U10 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03096 Seca-Chr3 55688100 55690039 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03096 3 233 Glutathione S-transferase Gene Family AT1G74590 48.485 8.93e-80 237