Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03095 ATGGCAGAGCAAGACAAGGTGATCCTACTCGGAATTTGGGGTAGCCCTTTTGTCTCCAGGGTGATTTTGGCCCTTAAACTCAAGGGCATAGCCTACGAGTATGTAATAGAAGATTTAACAAACAAAAGTGATCTGCTTCTCAAATCCAATCCTGTTTACAAAAAGGTTCCTCTGCTTATTCATAATGGAAAGCCCATAGCTGAATCCCTTGTGATCCTTGAGTATATTGACGAAACTTGGAAACGTGGCCCTAAACTGCTGCCTCACAATCCCTACAAAAGAGCCCAAGCTCGCTTCTGGGCTAAATTCATTCACGAACAGTTACAGATATTTGAGACCATTTCTTTAGTAGTCAAAACTGAAGGAGAAGCGCAACAAAAGGCCATTAACGATGTGTTTGATCAGCTGAATCTGCTTGAAAATGGGATGAAGACTTTTTTTGAGGAAGGCAAACCTTGTGTTGACCAGAATAACGTTGGTCTCCTAGACATTGTCTTTTGTTCGTTGTTTGGCCCTCACGAGGCTCAGGAAGAAGTTATTGGGATAAAGTTCATGGTGGCAGAGAAGTTTCCTGTGTTATTTTCTTGGCTGATGACTATTGTTGAGCTCCAAGCAGTGAAAGAGATACTCCCTCCTCATGATAAAGCAGTGGATGTTATTCAGTTTATAAGGCAGTCTGCACTAAAATCCTTGCCAATACCTCATGATGTGCTAGTTAAGCATACTACAAGTACCAAAATTCTGTCTTTTGTTGGTTTGGTTGATTTGATTAGTTTAATTTGCTAG 786 0.4097 MAEQDKVILLGIWGSPFVSRVILALKLKGIAYEYVIEDLTNKSDLLLKSNPVYKKVPLLIHNGKPIAESLVILEYIDETWKRGPKLLPHNPYKRAQARFWAKFIHEQLQIFETISLVVKTEGEAQQKAINDVFDQLNLLENGMKTFFEEGKPCVDQNNVGLLDIVFCSLFGPHEAQEEVIGIKFMVAEKFPVLFSWLMTIVELQAVKEILPPHDKAVDVIQFIRQSALKSLPIPHDVLVKHTTSTKILSFVGLVDLISLIC. 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03095 261 SUPERFAMILY GST C-terminal domain-like 78 225 IPR036282 -
Seca3g03095 261 Pfam Glutathione S-transferase, N-terminal domain 7 78 IPR004045 -
Seca3g03095 261 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 10 217 IPR045073 -
Seca3g03095 261 SFLD Main.3: Omega- and Tau-like 3 228 IPR045073 -
Seca3g03095 261 SFLD Main (cytGST) 3 228 - -
Seca3g03095 261 SUPERFAMILY Thioredoxin-like 6 108 IPR036249 -
Seca3g03095 261 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 226 IPR010987 -
Seca3g03095 261 CDD GST_C_Tau 91 223 IPR045074 GO:0004364|GO:0006749
Seca3g03095 261 Gene3D Glutaredoxin 1 86 - -
Seca3g03095 261 FunFam Glutathione S-transferase U9 87 230 - -
Seca3g03095 261 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Seca3g03095 261 CDD GST_N_Tau 7 80 - -
Seca3g03095 261 FunFam Tau class glutathione S-transferase 1 89 - -
Seca3g03095 261 Gene3D - 87 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03095 Seca-Chr3 55676282 55677302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03095 3 229 Glutathione S-transferase Gene Family AT1G74590 44.493 5.87e-68 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03095 K00799 - gmx:547581 307.375