Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03057 ATGGAGAAGGACTATGATTCCTTGCAGGCTAGCTATGACGATCTTAAGGCCAACTTTGACAACCTTTTGAGGGAGAATGATAAATTGAAAGCAGAGGTGGTGGCAAGCCTCACGGAAAAGGTGATTGGAAGAGATAAACAAGAGGGAGACTCTGAACAGGGTAAAACAAACGGGTTGCTGGAGTCACTGCAAAAGCCTTTGATTGATTCAGCCTCGGAGGGTGAAGGATCCAAAGTGTCAGTTCAACAAGAAGACAATAGTTCAGCCAAGAGTGACATGTTTGATTCGGGGAGCCCGCATTACACGGATGGAGTTCACTCTGCATTTGAACCTGATCAGTCTGATTTGTCACAGGATGAAGAAGACAACTTGAGCAAGATCCTATTGCCTCCATACATCTTCCCCAAACTTGAAGAAGTTGATTACTCCGATACGCCTCATAGTTCTTGTAATTTTGGATTTCATGAGGAAGATCATGCCATATGGTCCTGGTCTTACTGA 501 0.4431 MEKDYDSLQASYDDLKANFDNLLRENDKLKAEVVASLTEKVIGRDKQEGDSEQGKTNGLLESLQKPLIDSASEGEGSKVSVQQEDNSSAKSDMFDSGSPHYTDGVHSAFEPDQSDLSQDEEDNLSKILLPPYIFPKLEEVDYSDTPHSSCNFGFHEEDHAIWSWSY. 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03057 166 Coils Coil 5 32 - -
Seca3g03057 166 Pfam Homeobox associated leucine zipper 1 40 IPR003106 GO:0006355|GO:0043565
Seca3g03057 166 MobiDBLite consensus disorder prediction 39 122 - -
Seca3g03057 166 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 125 IPR045224 GO:0003700
Seca3g03057 166 MobiDBLite consensus disorder prediction 75 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03057 Seca-Chr3 54616261 54618399 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03057 1 164 Homeobox Transcription Factor Family AT3G01470 28.743 3.51e-09 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03057 - - gmx:732618 244.588