Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03054 ATGGAACAAGACCTTAGCAGGTTTGATGCGACCAAGTTGCATCCACTTTCTCCTGAAGTCATATCTCGGCAGACTACTATTAATGCTGGCACCATTGGCTACGTGGAACATGGAAAGTCAACTGTTATGAAAGCCATATCAGGTGTTCATACTCTGCGGTTCATATGA 168 0.4405 MEQDLSRFDATKLHPLSPEVISRQTTINAGTIGYVEHGKSTVMKAISGVHTLRFI. 56
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03054 55 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 15 49 IPR027417 -
Seca3g03054 55 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03054 Seca-Chr3 54573171 54573338 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03054 2 54 Eukaryotic Initiation Factors Gene Family AT4G18330 75.472 3.96e-23 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03054 K03242 - ming:122070508 92.8189