Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03033 ATGTATTGGGCATTGAAGAAAAGAAAGCTAATCAAACTTAAAGAACAATTTTTTCAACAAAATGGTGGCTTATTGTTACAACAGCAAATTGCTAGGCATAAAGGGTCAACTGAAATGGCTAAAGTCTTCATTATTGAGGAGCTAAAGGAGGCCACCAACAACTTTGATGAAAGCAAGATCCTAGGCCAAGGAACAGTTTACAAAGGATTATTACTAGGTTGTTGTTTAGAAATAGAAGTTCCCTTGCTTGTTTATGAATTCATCCCCAATGGTACTCTTTATGAGTATCTTCATAATCAAAACCAGGCTTTAAATCTTACATGGAAAACAAGATTGAGAATAGAAACAGAAGCTATTGGAGCCCTGGCATATTTGCATTCTGCTACCTCTGCACCAATCATACATAGAGATGTGAAAACTACAAATATACTACTTGATCATAATCTCACTACAAAGGTTTCTGATTTTGGAGCTTCTAGAATTATTCCTTTTGATCAAACTCAATTAACCACTTTGGTGCAGGGGACATTGGAGTATCTTGACCCAGAGTACTTTCACACAAGCCAGTTAACAGAGAAAAGAAAGAAGGCACTCTCTTTTGACAGGCCAGAGGCTGATAGAAATCTTGCAGTGTACTTTGCTTCTTCAATGAAAGAGGGTCAACTACTTCATATCGTGGAGAACCACATGATAGATAAGAAAAATGTTGAGAAACTAATTGGAGTTGCCAATATTGCAATACGTTGTTTAATGATGAAGGGAGAGGAGAGACCCACCATGAAGGAAGTGGCAATGGAACTTGAGGGACTAAGAGGTATGGAAAAGAACAAATGTGAAAGTGTTAATTTATCTTCAGAAGAGATTGGAAACTTGCTCAAAGCAGCACCATTTGTTTTCAATGTTGAAGATGGCGCTGGTGGAAGTGGCATTACTCCTGGACCTGGTTTTGATAGTTTAAATTGTATTTCAATGTCATTGAGTGGTGAAAGATGA 993 0.3746 MYWALKKRKLIKLKEQFFQQNGGLLLQQQIARHKGSTEMAKVFIIEELKEATNNFDESKILGQGTVYKGLLLGCCLEIEVPLLVYEFIPNGTLYEYLHNQNQALNLTWKTRLRIETEAIGALAYLHSATSAPIIHRDVKTTNILLDHNLTTKVSDFGASRIIPFDQTQLTTLVQGTLEYLDPEYFHTSQLTEKRKKALSFDRPEADRNLAVYFASSMKEGQLLHIVENHMIDKKNVEKLIGVANIAIRCLMMKGEERPTMKEVAMELEGLRGMEKNKCESVNLSSEEIGNLLKAAPFVFNVEDGAGGSGITPGPGFDSLNCISMSLSGER. 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03033 330 Gene3D Transferase(Phosphotransferase) domain 1 50 194 - -
Seca3g03033 330 Pfam Protein tyrosine and serine/threonine kinase 71 193 IPR001245 GO:0004672|GO:0006468
Seca3g03033 330 SUPERFAMILY Protein kinase-like (PK-like) 39 265 IPR011009 -
Seca3g03033 330 ProSiteProfiles Protein kinase domain profile. 1 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g03033 330 FunFam Wall-associated receptor kinase 2 88 290 - -
Seca3g03033 330 SMART serkin_6 24 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g03033 330 Gene3D Transferase(Phosphotransferase) domain 1 195 290 - -
Seca3g03033 330 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 1 71 IPR045274 GO:0007166
Seca3g03033 330 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03033 Seca-Chr3 54315280 54316442 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03033 5 271 Receptor kinase-like Gene Family AT1G21230 47.077 1.31e-89 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Seca3g03033 PK_Tyr_Ser-Thr 5.5e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03033 - - gmx:100798027 418.698