Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03029 ATGGAGCATGTGAACTTGAATTTCTACCTTAACTCGAAGTGGGTATCAACGGTGGCGAGTATATGGATTCAGTGCACTAGTGGGTCTCTCTACACTTTCTCCATCTACTCCCAAACTCTAAAATCAACTCAGCACTACGATCAGTCAACGCTCGACATCGTCTCTGTCTTCAAGGACATCGGAGCCAACGTTGGCGTCATCTCTGGCCTCCTGTACGATTTCCTTGCCCGCAGAACAGCATCCGGGCCTTTGCTGGTCCACTTCTTGGGCTCGGCCCAATGTTTCTTGGGCTATTTCCTCATGTGGGCCGCCGTCGCCGGCCTCCTTCCGCAGGTTCCGGTGCCGCTTATGTGCCTGTTTATGTTCGTTGCAGCTCATGCTCAGAGCTACTTTAACACTGCTAATGTTGTCACCGGCGTTCATAATTTCCCTAGCTACAGTGGAACCATCGTCGGCATTATGAAGGGGTTTCTTGGTCTCAGTGGAGCAATATTAATTCAAGTGTATCGAACAATATTCAACAACAAGCCTATGTCATATCTTCTGATGTTGGCACTCTTACCACCTATCAATACTTTGCTGCTTATGGGGTTTGTAAGAATCCAAAACACTCATGAGAGAGAGGAAAGGAAGTATCTAAATATATTTTCTTCCATGGCTGTGGTTATTGCTGCATATCTTATGGTTGTTATAATTCTAGAGAACATCCTTAGCCTGCAATTACAGGTCCGCATCTTTATATTCATTGTGCTTATTTTGTTGCTAGTCTCACTTCTTTGTATTGCATTTAAAGCACATGAAAGGGTGTCCAGTAGTGCTTCAGAAAGTTTTCTTGATGAGGGGTCCCAACTAATTGTGGAGCCAGCACCCCTGGAGACTGAGAAGATGGATGCAAGGCAAGATTCTTCCTACAATCCTTTGCCTGATACTAACAATCAAAGGGCTTTGCAACTAGGAGATAACTTGAATCTTTTCCAAGCAATGAAAACTTTGAACTTTTGGATTTTGTTTGTTTCTATGGCATGTGGTATGGGATCAGGACTTGCAACAGTTAATAATATGGGCCAAATAGGGGAATCCCTTGGTTATACCAGCCATGAGACAAGTTCCTTGGTTGCTTTGTGGAGCATTTGGAATTTTATTGGCCGCTTTGGAGCTGGTTATGTATCAGATTATTTTTTACACACAAGAGGATGGGCAAGACCTTTATTTATGGTCATCACTTTGATGATCATGAGCATTGGCTATGTGGTGATTGCTTATGGGCTGCCGGGTGCTCTGTATGTTGGTTCAATTTTGGTGGGTATTTGTTATGGCTCTCAGTGGTCTCTAATGCCCACAATCACTTCTGAGATATTTGGTGTGGGACATATGGGCAGCATATTCAACACCATTACCATAGCAAGCCCAGTGGGATCTTATATATTCTCTGTTAGAGTAGTTGGGTATATATATGATAAAGAAGCATCAGAAGGAAATACATGCATTGGAACTCATTGTTTTATGTTTCCTTTTCTCATAATGGCATTTGCAACTATTCTGGGTTCTGTGACAGCTCTAGGCTTGTTTTTGCGGACCAAAAACTTTTATGCTCAGGTTGTGCTGAGAAGAATTCAAAATATTCTGTGA 1629 0.4285 MEHVNLNFYLNSKWVSTVASIWIQCTSGSLYTFSIYSQTLKSTQHYDQSTLDIVSVFKDIGANVGVISGLLYDFLARRTASGPLLVHFLGSAQCFLGYFLMWAAVAGLLPQVPVPLMCLFMFVAAHAQSYFNTANVVTGVHNFPSYSGTIVGIMKGFLGLSGAILIQVYRTIFNNKPMSYLLMLALLPPINTLLLMGFVRIQNTHEREERKYLNIFSSMAVVIAAYLMVVIILENILSLQLQVRIFIFIVLILLLVSLLCIAFKAHERVSSSASESFLDEGSQLIVEPAPLETEKMDARQDSSYNPLPDTNNQRALQLGDNLNLFQAMKTLNFWILFVSMACGMGSGLATVNNMGQIGESLGYTSHETSSLVALWSIWNFIGRFGAGYVSDYFLHTRGWARPLFMVITLMIMSIGYVVIAYGLPGALYVGSILVGICYGSQWSLMPTITSEIFGVGHMGSIFNTITIASPVGSYIFSVRVVGYIYDKEASEGNTCIGTHCFMFPFLIMAFATILGSVTALGLFLRTKNFYAQVVLRRIQNIL. 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03029 542 Pfam Major Facilitator Superfamily 336 526 IPR011701 GO:0022857|GO:0055085
Seca3g03029 542 SUPERFAMILY MFS general substrate transporter 16 206 IPR036259 -
Seca3g03029 542 Gene3D MFS general substrate transporter like domains 196 520 IPR036259 -
Seca3g03029 542 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 14 531 - -
Seca3g03029 542 Pfam Nodulin-like 13 262 IPR010658 -
Seca3g03029 542 SUPERFAMILY MFS general substrate transporter 214 528 IPR036259 -
Seca3g03029 542 CDD MFS_Mch1p_like 12 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03029 Seca-Chr3 54283604 54286677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g03029 10 540 Nodulin-like Gene Family AT1G74780 54.428 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03029 - - lja:Lj1g3v0437880.2 894.419