Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca3g03025 | ATGTCACAAGGATCTCCCCCTCCTCCGCCACCAGCAACCACCGAACCCTGCAACCCACCCTCGCCGGAAAAGGAGGAAACCACCACTAACGCTGCTCCTCCTCCGGCCGGCACCAGGAACCGCCCCTCCCGCGCCTGCACCATTCGCGCCGCGGCGCGCCTCTATTCGACTTCGCAGCCGGCGATCGAGCGCAAGCCCAAGGCCGCGGCGGCGAAGAAGGAGAAGCGCCGCGAGGACTCGCCGCCGCCGTCGCCGTCACCGCAGCAGCAATGCAGCAAGATCGTGACGACACTGGTGGAAGCGCCCCCGGCCTCGCAGTTGCCACGGTGGAACCTCCGCTCCATGTGGGAGTTAGCTTCCATACTCAATTTCTTGCATCTATTTAGGCCTCTTTTGAATATATCAGTAGAATTCTCGGCTGAAGAGTTCGAAACAGCTCTTCTTACCCCCAATGACACATTGGGTGATATACATATGCCTTTACTAAAGGCAATCCCTCCCATTACAAGGATGGCACTCTCACGTGATACTTGGATTACTGTATTATGCAGAAAATTGAGAGATTGGTGGCACTGGGTTGCTGATGGGGATCTTCCCATTGTTGCTTCACATGGGGCGGAGATTGAAGTATATAAATCGCTTGATCCAGGAGTCCGTGTCATTATCTTAAAAGCATTATGTGACATTCGTGTTGAGCAAGAAGATATCCGAAGTTACATTGACAACTCACTCAAACAAGGTGTTCAACTTTCAACATTCCGTAAGGAGCGAATTGGTGGTGATTCACATGGAGTTTCTTTTTGGTATGAAGATGACCCAATTATTGGTCATAGATTGTATCGGGAAATAAGGAAAACTGAAGTGGTTCAAGTGAAGAAAGGGAAACCAAGGGGTTCCCAGGTTCTTTCTAATACAACATACCAATGGGAAACCGTTGCTACCAATTTTGATGAATTTCAAGATGTTTCTGAGAAGCTTCTCTCAAGTAAAAACAGAATGGAGGCTTCTGTGGGGAAAAAGTTGAAGATAGACATGCTTCCTGAAATTGAGAAGGTTCACAAGAGAAAGGAGAGGTTAATGAAGAAACAACACAGACAAGCTCTTCTTCTTGATAATTTCTTGGGTGTTGATGGGCTTGCTGCAGGGCGTTCACTTCGTGATAGGAAACCTGTTACCTACACTTTTGATGATTATGATCGGTCCATCAATGAGGCTATTAAGATAACCAAACAGAAACCACCATCCCCAGAACGTATACCCAGGAGAGAAGCAGGGACAAAACCTGAAGCTTTAACTAATGGTAAATTGAGCGGTCCTTCACATGACAGTCAACATCTGAATTTCAGTATGCCATCTCCAAAATCACCTGACTTTGATGATGTGGAGGAAGAAAATCAAACTGACCCATTGGATCGAAGCAATCGGCAAAGACGGAGGCCTACACGGTATTCAGAGAAAGAGTTTGTTGAAGCAGTGTCAGATAATGAAGCCGACTTTGACAGTGATGATGATATTGTTGGAGAAGCCGTATATGATGAAGAATATCTCCGGAAACGTAAGCAGAGGAAGGTATCCAGTAGCTCTGCCTCTGAAGGAGATGAAGAATATCATTGGGATGAAGATAATGTTGAAGATGAAGACGAAGAAGATGAAGATTCCTTAAGTGTCAGTGAGGATAGTGACAAGCCCCGTAAATTCAAGCAATTGCCAGGCCGGACTAGGAGGGAAACTAAACTCAGGTCTGTGGGTGATATTCAATCAGGTCTAAGACGCAGTAAGAGGGCAACTAGAAACCGCATAAATTACCAACAGTATGAGATCTCTGAGTCAGAAACAGAGTTAACTAAACCTGAGAAATCTAATGCATCAGATGACCGTTCAGATCCAAGTGAGAATGGGGAATTTATGATGGAAAGTGAAGATTCAGATGACAATGATGGTGAAGATCAGGAAATGAAAGTCGAGGAGCCAGTTACTTACGCAGCAGTAGAAGAGAATGAATATCCTGCTGCAGAAGAGAATGAACAAAACCAGGACCAGCCTCCTGAAAAATCAAGTAGTCCAGTTCAGGAGGAGAAATCAAGTAGTCCGGGTCAGGAGGAAGCTGAGGGCGTGACAAAAAGACATTTCCTTGATTTGAATGAGGTTGCCCCTAGCTCAGGTTTTGATGATGGTCCAAATACATCAACGAAAGATGAAGGCAACAATGATGATTTCTGA | 2220 | 0.4595 | MSQGSPPPPPPATTEPCNPPSPEKEETTTNAAPPPAGTRNRPSRACTIRAAARLYSTSQPAIERKPKAAAAKKEKRREDSPPPSPSPQQQCSKIVTTLVEAPPASQLPRWNLRSMWELASILNFLHLFRPLLNISVEFSAEEFETALLTPNDTLGDIHMPLLKAIPPITRMALSRDTWITVLCRKLRDWWHWVADGDLPIVASHGAEIEVYKSLDPGVRVIILKALCDIRVEQEDIRSYIDNSLKQGVQLSTFRKERIGGDSHGVSFWYEDDPIIGHRLYREIRKTEVVQVKKGKPRGSQVLSNTTYQWETVATNFDEFQDVSEKLLSSKNRMEASVGKKLKIDMLPEIEKVHKRKERLMKKQHRQALLLDNFLGVDGLAAGRSLRDRKPVTYTFDDYDRSINEAIKITKQKPPSPERIPRREAGTKPEALTNGKLSGPSHDSQHLNFSMPSPKSPDFDDVEEENQTDPLDRSNRQRRRPTRYSEKEFVEAVSDNEADFDSDDDIVGEAVYDEEYLRKRKQRKVSSSSASEGDEEYHWDEDNVEDEDEEDEDSLSVSEDSDKPRKFKQLPGRTRRETKLRSVGDIQSGLRRSKRATRNRINYQQYEISESETELTKPEKSNASDDRSDPSENGEFMMESEDSDDNDGEDQEMKVEEPVTYAAVEENEYPAAEENEQNQDQPPEKSSSPVQEEKSSSPGQEEAEGVTKRHFLDLNEVAPSSGFDDGPNTSTKDEGNNDDF. | 740 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca3g03025 | 739 | MobiDBLite | consensus disorder prediction | 467 | 493 | - | - | |
Seca3g03025 | 739 | MobiDBLite | consensus disorder prediction | 494 | 509 | - | - | |
Seca3g03025 | 739 | MobiDBLite | consensus disorder prediction | 557 | 581 | - | - | |
Seca3g03025 | 739 | PANTHER | REMODELING AND SPACING FACTOR 1 | 67 | 701 | IPR028938 | GO:0006355|GO:0031213 | |
Seca3g03025 | 739 | MobiDBLite | consensus disorder prediction | 510 | 533 | - | - | |
Seca3g03025 | 739 | MobiDBLite | consensus disorder prediction | 611 | 633 | - | - | |
Seca3g03025 | 739 | MobiDBLite | consensus disorder prediction | 405 | 739 | - | - | |
Seca3g03025 | 739 | Pfam | DDT domain | 120 | 165 | IPR018501 | - | |
Seca3g03025 | 739 | MobiDBLite | consensus disorder prediction | 696 | 710 | - | - | |
Seca3g03025 | 739 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Seca3g03025 | 739 | MobiDBLite | consensus disorder prediction | 673 | 695 | - | - | |
Seca3g03025 | 739 | MobiDBLite | consensus disorder prediction | 66 | 81 | - | - | |
Seca3g03025 | 739 | MobiDBLite | consensus disorder prediction | 436 | 451 | - | - | |
Seca3g03025 | 739 | MobiDBLite | consensus disorder prediction | 534 | 556 | - | - | |
Seca3g03025 | 739 | MobiDBLite | consensus disorder prediction | 1 | 92 | - | - | |
Seca3g03025 | 739 | MobiDBLite | consensus disorder prediction | 20 | 36 | - | - | |
Seca3g03025 | 739 | MobiDBLite | consensus disorder prediction | 634 | 651 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca3g03025 | Seca-Chr3 | 54233409 | 54241905 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | DDT | Seca3g03025 | DDT | 5.4e-05 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca3g03025 | - | - | gmx:100796430 | 1081.63 |