Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g03019 ATGGATAATTCTGAAAATGGTTTCTGCATTAAATTGGAAGAAGATGATGATTCATTATTTGACTCTGGTTGTCATGATGATGTTAGTGTGGAGGATGGTGATTTTCCTGAGAAGAATGAAAAGGTAGACATTGACGTAGGAGAAGGTCTTTTTAAAAAGATTTTTGACCTAACTGCTGATGAATTTCAGTGCCTTGAGTTTGGAAGTGAAGAAGAAGCATTTCATTATTATGAGTTATATGCAAATTTTCATGGGTTTGTGGTTTGGAAAGATGATGTAACACAAGATATTAGGGGCAATATTATTATGTGTTTGTTTGTTTGCAATAGGGAGGGATTAAGGAAGAAGAAGCACTTTATGAGGGTGGATAGGAAGAGGGAGCATATACCACTCACCCGTACAAATTGTCAAGTTAAGCTTCGTATACACTTTGATTACAAGATTTTAAAATGGATAGTTGTGTCATTTGAGGAGTGTCATAACCATGAACTTACCCCTTCAAGATATGTTCACCTATATTCTGCTTATCGTATGTTGACAGATGGGGATTGTTAG 555 0.3568 MDNSENGFCIKLEEDDDSLFDSGCHDDVSVEDGDFPEKNEKVDIDVGEGLFKKIFDLTADEFQCLEFGSEEEAFHYYELYANFHGFVVWKDDVTQDIRGNIIMCLFVCNREGLRKKKHFMRVDRKREHIPLTRTNCQVKLRIHFDYKILKWIVVSFEECHNHELTPSRYVHLYSAYRMLTDGDC. 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g03019 184 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 10 168 - -
Seca3g03019 184 Pfam FAR1 DNA-binding domain 76 165 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g03019 Seca-Chr3 54154277 54154831 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g03019 FAR1 1.3e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g03019 - - ccaj:109792835 182.956