Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02995 ATGGAAAGTGGTGCTAAGGGATGTGAGGTCATTGTCAGTGGAAAATTGAGAGCCCAGAGGGCCAAATCCATGAAGTTCAAGGATGGGTACATGATTTCTTCTGGGCAACCAGTCAAGGATTACATTGACTCTGCAGTCAGGCATGTGCTCCTCAGACAGGGTGTTCTTGGTATCAAGGTGAAGATCATGCTTGATCGGGATAAAGGGAAACAGGGTCCTCAAACGCCCCTCCCTGATATTGTCACAATCCACGCTCCAAAAGAGGAAGAAGAATACACCCAGCCTGCTGATGTTTTGTCAACTGGTATTGAAGTCTCTGTCGCTTGA 327 0.474 MESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIMLDRDKGKQGPQTPLPDIVTIHAPKEEEEYTQPADVLSTGIEVSVA. 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02995 108 Pfam Ribosomal protein S3, C-terminal domain 1 62 IPR001351 GO:0003735|GO:0006412
Seca3g02995 108 SUPERFAMILY Ribosomal protein S3 C-terminal domain 1 65 IPR036419 -
Seca3g02995 108 FunFam 40S ribosomal protein S3 1 101 - -
Seca3g02995 108 ProSitePatterns Ribosomal protein S3 signature. 21 57 IPR018280 -
Seca3g02995 108 Gene3D - 1 92 IPR036419 -
Seca3g02995 108 PANTHER 30S/40S RIBOSOMAL PROTEIN S3 1 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02995 Seca-Chr3 53785573 53786107 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02995 1 100 Cytoplasmic Ribosomal Protein Gene Family AT5G35530 80.198 7.26e-55 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02995 K02985 - gmx:100795045 191.045