Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02950 ATGGTAGCGCAGCAAGACCAGCTGGATCTGGCAGCGAGGTATATAAAGCATATGAGAGAAAGAATAGATAAATTAAAGAGGCAGAAGGAGGAAGCTGTAAGGTCAAACCAAACCGATAAAATGTTCAATATTGAGTCAAAATTGCCAGTACTTGAGTTAAGAGACTTGGGTTCCGGCATTCAAGTTATGTTGGTGAGTGGGTTGAACAACAAGACCTTCATGTTATACGAAGTAATTAGTGTCCTTGAGGAAGAAGGCGCTGAAGTCGTCAATGCTAGCTTCTCAACCGTTGGGGATAAAATTTTTTACACTGTACATGCTCAGGTTAAAATATCAAGACTGGGTGTAGAAACGGCGAGGGTATATGAGAGGCTTCAGGAGTTTATTGCCCCACTAGAAAGCTGCTGGGAGGACGTTTGA 420 0.4262 MVAQQDQLDLAARYIKHMRERIDKLKRQKEEAVRSNQTDKMFNIESKLPVLELRDLGSGIQVMLVSGLNNKTFMLYEVISVLEEEGAEVVNASFSTVGDKIFYTVHAQVKISRLGVETARVYERLQEFIAPLESCWEDV. 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02950 139 Coils Coil 8 35 - -
Seca3g02950 139 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 4 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02950 Seca-Chr3 52729080 52730555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02950 6 129 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 33.333 2.25e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02950 - - gmx:100790403 203.756