Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02918 ATGGAAGAAACATTTGTTCCCTTCCGTGGGATTAAAAGTGACCTTAAAGCAAGAATTGTGTGCTACAAACAAGATTGGACCAGTGGATTCCGAGCGGGTATCAGGATCCTTGCCCCGACTACATACATATTTTTTGCTTCAGCAATTCCTGTTATTTCTTTTGGAGAGCAACTAGAGAGAAATACTGATGGAACTCTCACTGCTGTGCAGACTCTTGCATCAACTGCACTCTGTGGTATTATCCACTCAATCATTGGAGGGCAGCCTCTCCTCATACTAGGTGTAGCTGAGCCAACAGTTCTGATGTATACATTCATGTATAACTTTGCAAAGGATCGAAAGGATTTGGGACACAAACTATTCCTGCCTTGGACTGGATGGGTGTGTGTTTGGACTGCCCTGTTGCTCTTCTTGCTGGCCATTCTTGGTGCATGCTCCATAATCCGCAGATTTACACGCCTTGCTGGTGAACTATTTGGTCTGCTAATTGCAATGCTCTTTATGCAGCAGGCTATAAAGGGACTTGTGGAAGAGTTTGGTGTACCTAAGACCCAGAGAGAAGGTACCAATCAGATTGCACTCCAATCCTCTTGGCTGTTTGGCAATGGAATGTTTGCTTTAGTTTTGTCATTTGGCCTTCTTTATACGGGTCTACGAAGCCGCAAGGCTAGATCCTGGCGTTATGGAACAGGTTGGCTAAGGGGATTTATAGCTGATTATGGAGTCCCACTAATGGTTCTCATATGGACTGGTGTGTCTTACATACCTGTCAATAAGGTTCCAAGGGGAATCCCCAGGCGACTTTTCAGTCCAAACCCATGGTCTCCTGGTGCATACTCAAATTGGACTGTTGTCAAGGAAATGTTGAATGTGCCTCCCTTATACATTATTGGAGCATTTATACCAGCAACTATGATTGCGGTGCTTTACTACTTTGATCACAGCGTTGCATCACAACTTGCGCAGCAGAAGGAGTTCAATCTAAGAAAACCATCATCTTATCATTATGACTTGCTACTCCTGGGCTTTTTGACCATATTGTGTGGGCTTATTGGCATTCCTCCTTCCAATGGTGTGATTCCACAATCTCCAATGCATACAAAAAGCTTAGCTACTCTGAAACATCAGCTTTTACGGCATAAGCTTGTATCTACTGCACGAACAAGCATGCAGAAAAATGTGAACCTGACTCAGTTATACCAAAGTATGAAAGAAGCATATGATGTAATGCAGACTCCATTGGTTCCCCATATGGCACCCACCTTGGTAAATGGGCTGAAAGAGCTGAAGGAATCTACCATTGCACTGGCTTCAAGTCATGGATACATGGATGCCCCTGTTGATGAGGTTGTCTTTGATGTGAATAAGGATGTTGATGACCTTTTGCCTGTTGAAGTTAAAGAGCAGCGCCTCAGCAATCTACTGCAGGCATCAATGGTTGGGGCTTGTGTTGCTGCTATGCCTCTTTTAAAGAAGATACCAACTTCAGTACTTTGGGGTTACTTTGCCTTCATGGCAATTGAAAGCTTGCCAGGGAATCAATTTTGGGAGAGAATATTGTATCTTTTCACTGCTCCAAGTCGAAGATACAAACTGCTGGAGGAACACCATGCCACCTTTGTTGAGACTGTGCCCTTTAAAGCAATTGCCTTGTTTACTTTGTTCCAGACAGTTTACTTGCTTCTTTGCTTTGGCATAACATGGATACCAATTGCTGGGGTCCTTTTCCCATTGTTAATCATGCTTCTAGTCCCAGTCCGTCAATATATTCTTCCCAAGTTTTTCAAAGGAGCTCATCTTCAAGAGTTGGACGCAGCAGCATATGAGGAATCACCTGCCATTGCTTTCAACATGTCCTTTGAAGATCCAAGTAACCAGGCATCAACAGCCCATATCAGTGGTGGGGAAATTCTTGATGAAATTATTACAAGGAGTCGTGGAGAATTTCGCCACACTCACAGCCCCAAAACAACAAGTTCAACTCCAACTTCAACTTCAATAGGAGATATAAGACCTGCTAATAGCCCACAAACAAGGAGGATTCCAAGCCCTCGAGTAACTGTATTGAGAGGGGAAAGCAGCCTAGGACCAACTGGGAAGGAGATGAAGTCAATGAAAACTCCTAGTCCAAAGACATCAAATCTTGGAAAAGATATCAATGGTTCACCTTCAAGTTAA 2178 0.4353 MEETFVPFRGIKSDLKARIVCYKQDWTSGFRAGIRILAPTTYIFFASAIPVISFGEQLERNTDGTLTAVQTLASTALCGIIHSIIGGQPLLILGVAEPTVLMYTFMYNFAKDRKDLGHKLFLPWTGWVCVWTALLLFLLAILGACSIIRRFTRLAGELFGLLIAMLFMQQAIKGLVEEFGVPKTQREGTNQIALQSSWLFGNGMFALVLSFGLLYTGLRSRKARSWRYGTGWLRGFIADYGVPLMVLIWTGVSYIPVNKVPRGIPRRLFSPNPWSPGAYSNWTVVKEMLNVPPLYIIGAFIPATMIAVLYYFDHSVASQLAQQKEFNLRKPSSYHYDLLLLGFLTILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRHKLVSTARTSMQKNVNLTQLYQSMKEAYDVMQTPLVPHMAPTLVNGLKELKESTIALASSHGYMDAPVDEVVFDVNKDVDDLLPVEVKEQRLSNLLQASMVGACVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKLLEEHHATFVETVPFKAIALFTLFQTVYLLLCFGITWIPIAGVLFPLLIMLLVPVRQYILPKFFKGAHLQELDAAAYEESPAIAFNMSFEDPSNQASTAHISGGEILDEIITRSRGEFRHTHSPKTTSSTPTSTSIGDIRPANSPQTRRIPSPRVTVLRGESSLGPTGKEMKSMKTPSPKTSNLGKDINGSPSS. 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02918 725 PANTHER ANION EXCHANGE PROTEIN 2 612 IPR003020 GO:0005452|GO:0006820|GO:0016020
Seca3g02918 725 MobiDBLite consensus disorder prediction 705 725 - -
Seca3g02918 725 FunFam probable boron transporter 2 18 60 - -
Seca3g02918 725 Gene3D Helical hairpin bin 18 60 - -
Seca3g02918 725 Pfam HCO3- transporter family 464 554 IPR011531 GO:0006820|GO:0016020
Seca3g02918 725 Pfam HCO3- transporter family 204 375 IPR011531 GO:0006820|GO:0016020
Seca3g02918 725 Pfam HCO3- transporter family 7 181 IPR011531 GO:0006820|GO:0016020
Seca3g02918 725 MobiDBLite consensus disorder prediction 648 725 - -
Seca3g02918 725 MobiDBLite consensus disorder prediction 654 682 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02918 Seca-Chr3 52061137 52067682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02918 1 700 Antiporters AT3G62270 74.714 0.0 1060
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02918 K24194 - gmx:100793554 1277.31