Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02916 ATGCAGAGCGCGGCTTTCACCCTCTCTCCTTCCCTCCCTCTCCGCAATCTCAACCGCCACCATTCCACGAGACCTTCCCTTAGCATCCGTCTCTCCGCCAAACACAACGATGGCGTAAACTCCAATGGCGCTTCCTCTTCCTTCATTCGCCGTTCCTGGTCCCTCGGACCTTCCTCTTCTTTCAAGTTCAGACCCCTCCCTCTCCTTTCTTCCTCCTCTGATCCATCCCCGCCTAGAGCCGCTTCCGTCCCTGACAGCGCCGGTTCCGCTGAATCCGGCTCCCTATTCAAAACTCTCGAGCTCGGAGCCTTGTTTGGTCTCTGGTACCTTTTCAATATCTACTTCAACATCTACAACAAACAGGTCTTGAAGGCGTTTCATTTCCCTGTAACTGTGACTGCTGTTCAATTTGCTGTTGGGTCTGTCCTTGTATCATTCATGTGGGGCTTAAATCTCTACAAGAGGCCGAAAATCAGTGGTGCACAGCTTGCAGCGATATTGCCACTGGCTATTGTGCATACTTTGGGGAACCTTTTCACGAATATGAGTCTTGGAAAGGTGGCTGTGTCTTTCACTCACACGATCAAAGCCATGGAGCCTTTCTTTTCCGTGATCCTTTCTGCCATGTTCCTTGGAGAGACGCCTACACCATGGGTGGTTGGTTCCCTTCTGCCCATCGTTGGTGGAGTTGCACTGGCATCTGCTACTGAGGCCTCTTTCAATTGGGCTGGTTTTTGGAGTGCAATGGCTTCTAATGTGACAAATCAATCTCGTAATGTTCTTAGCAAAAAGGTCATGGTTAAGAAAGAGGACTCTATGGACAACATAACTCTTTTCTCTATAATAACAGTAATGTCCTTCTTCTTGTTAGCACCTGTGGCTGTCTTCATGGAGGGTGTCAAATTTACCCCGGCTTACCTGCAATCTGCTGTGAGTATCTTGATGGTCAAAGTAGATAGGATCACTGTTATCATGGGGCTAAATGTTAGACAAGTGTACATCAGATCTCTTCTTGCTGCACTCTGTTTTCATGCATACCAGCAAGTTTCTTATATGATATTGCAGAGGGTATCACCTGTTACCCACTCTGTGGGCAATTGTGTGAAGCGGGTTGTGGTCATTGTTAGCTCGGTTATCTTCTTCCAAACACCTGTCTCTCCTGTGAATGCTTTCGGGACTGCTATAGCTCTCTCCGGCGTTTTCCTTTATTCAAGGGTGAAGCGAATTAAGGCAAAGCCAAAGACAGCTTAA 1251 0.478 MQSAAFTLSPSLPLRNLNRHHSTRPSLSIRLSAKHNDGVNSNGASSSFIRRSWSLGPSSSFKFRPLPLLSSSSDPSPPRAASVPDSAGSAESGSLFKTLELGALFGLWYLFNIYFNIYNKQVLKAFHFPVTVTAVQFAVGSVLVSFMWGLNLYKRPKISGAQLAAILPLAIVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFLGETPTPWVVGSLLPIVGGVALASATEASFNWAGFWSAMASNVTNQSRNVLSKKVMVKKEDSMDNITLFSIITVMSFFLLAPVAVFMEGVKFTPAYLQSAVSILMVKVDRITVIMGLNVRQVYIRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIFFQTPVSPVNAFGTAIALSGVFLYSRVKRIKAKPKTA. 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02916 416 Pfam Triose-phosphate Transporter family 100 404 IPR004853 -
Seca3g02916 416 SUPERFAMILY Multidrug resistance efflux transporter EmrE 329 407 - -
Seca3g02916 416 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 99 414 IPR004696 GO:0016020|GO:0022857|GO:0055085
Seca3g02916 416 MobiDBLite consensus disorder prediction 70 90 - -
Seca3g02916 416 PANTHER SOLUTE CARRIER FAMILY 35 100 410 - -
Seca3g02916 416 SUPERFAMILY Multidrug resistance efflux transporter EmrE 146 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02916 Seca-Chr3 52033929 52037294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02916 1 416 Antiporters AT5G33320 69.195 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02916 K15283 - gmx:100804563 622.468