Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02866 ATGGAAACCAAACCCGGCCAAACCATCAAGCTCCTCTGTAGCTACGGCGGCAAGATCCTTCCTCGCGCCACCGATGGTGAGCTCCGTTACGTTGGCGGCCACACCAGAGTACTCGCCGTCGACCGTTCCATATCCTTTTCTGAATTGATGGTGAAACTGGGAGAGTTGTGCGGTTCGTCTGTGATCTTGAGGTGTCAATTGCCCAAGGGAGACTTGGAGACCTTGATCTCCATCACCAGCGATGAAGATTTGGCAAACATAATCGAGGAATATGATCGTGCCTCGTCCAAGTTAACTCATCCGTTGAAGATCAAAGCCATTCTTTCGCCGCCAAAATCAATCAAGAAGGTTTCTCCTGTTCCGTCGTCTTCGTCCAGTGCCAGTCACTCTCCGTCCAGATCGCCTCATACCTCATCCGAATCGCTGCCGTACGCGGCGGTTCATCGCATCAGCCGCTTCAATCGCTCGCCGCGGGCGCCGGTAGGGTATCCGATCGGCATCCGTAATGGATCGGCGAAAGCTGGTTGCTACCAGGGCCGGTTCGAGGGAAGCCCAAGGTTCCTCTATTGTGGGCCTCACTGCAACAATTACTGCCACTAG 600 0.5433 METKPGQTIKLLCSYGGKILPRATDGELRYVGGHTRVLAVDRSISFSELMVKLGELCGSSVILRCQLPKGDLETLISITSDEDLANIIEEYDRASSKLTHPLKIKAILSPPKSIKKVSPVPSSSSSASHSPSRSPHTSSESLPYAAVHRISRFNRSPRAPVGYPIGIRNGSAKAGCYQGRFEGSPRFLYCGPHCNNYCH. 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02866 199 MobiDBLite consensus disorder prediction 116 141 - -
Seca3g02866 199 MobiDBLite consensus disorder prediction 113 141 - -
Seca3g02866 199 SUPERFAMILY CAD & PB1 domains 25 115 - -
Seca3g02866 199 Pfam PB1 domain 27 97 IPR000270 GO:0005515
Seca3g02866 199 SMART PB1_new 23 111 IPR000270 GO:0005515
Seca3g02866 199 CDD PB1_UP2 12 97 - -
Seca3g02866 199 Gene3D - 29 107 - -
Seca3g02866 199 PANTHER OS05G0427100 PROTEIN-RELATED 7 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02866 Seca-Chr3 51290371 51291080 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02866 9 96 MAP Kinase Kinase Kinase AT5G57610 48.864 4.10e-26 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02866 - - lja:Lj0g3v0315899.1 263.077