Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02858 ACATTGGAACGATTTAGGGTTTCATTATGCGAATTAAGTTCTTGGACTTGCTCAAAAGCCCCACTGCGCCGTTCTCCTTCCTTCATCTTTTTCCGTTGCCGTTTCTGTCTCTGTCTCCATTTCCGTCTCCGTCTCAGTCTCCATCGCCATCGCCATCGCCATCATATCCTTGTTGCTTCTATGCTTTCGTTGCTTTTGCGTCATAATCGTTCGTTGTGCTTTCGCTGTGCTCCATCGCCCATTGTGAAGAAACTCCCTCGCCATTTTTTAAGATGGAAAGGGGTGTACACCACTAGCAGCGGAAGTAGTGGAGTTGGTCTAACCGCTGCTGTTCAGAAAGATCCAGTGACAAATGAGATGGTTCTGGAAGGGGGAACATTGGCTTTTTTAACTGTTACTTTCTTTTATTCTTCTGTAAACTGGATTACAGATTCAAAAAGGTTCCAGTATACAGGACAAACATTGGTTGGCAAGAATCATTTGAAATTCTGGAGCAATTATCCTCCCTTGCTTTGGATGTTCTATGGCTTAGTCTCAACACTCAAATACTCTGCTCTACTAAATGGGTTCATTGCAATAAGTGAAACGTCTATACCAATTTCCTCAATGGGATTTCATGGCTGCAATTTCAACTTGAAGAAATTTCTTTTCCGCACTTATGATGAAGATTTTGAGAAGGTTGTTGGAATCAGAACCATAGAGATAATGCCTACTTTCAATAAAGACTTGGATTCCGCATTCCAAACTGCAGGAGCAAACTCGCAGTTTTTGCAAAAAATGGCCCTCCTCATTATGACATACAATATTGGCTGGGAAATGACACAAAGAAGGTTTGTATTATTTCTTGTTTTATGA 855 0.4129 TLERFRVSLCELSSWTCSKAPLRRSPSFIFFRCRFCLCLHFRLRLSLHRHRHRHHILVASMLSLLLRHNRSLCFRCAPSPIVKKLPRHFLRWKGVYTTSSGSSGVGLTAAVQKDPVTNEMVLEGGTLAFLTVTFFYSSVNWITDSKRFQYTGQTLVGKNHLKFWSNYPPLLWMFYGLVSTLKYSALLNGFIAISETSIPISSMGFHGCNFNLKKFLFRTYDEDFEKVVGIRTIEIMPTFNKDLDSAFQTAGANSQFLQKMALLIMTYNIGWEMTQRRFVLFLVL. 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02858 284 Pfam Mlo family 140 232 IPR004326 GO:0006952|GO:0016020
Seca3g02858 284 ProSiteProfiles MCM family domain profile. 93 129 IPR001208 GO:0003677|GO:0005524|GO:0032508
Seca3g02858 284 Pfam MCM P-loop domain 93 127 IPR001208 GO:0003677|GO:0005524|GO:0032508
Seca3g02858 284 Gene3D - 42 130 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02858 Seca-Chr3 51112399 51115370 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02858 66 129 Core DNA Replication Machinery Family AT4G02060 50.000 3.43e-12 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02858 - - gmx:100805442 106.686