Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02839 ATGATTGCTGCAGAAGTATCTTATATATGGTTAAAACGTGAAACACTGGCAGCACATATTGCACTCTGCAAACTGCACTTCTCCTCAGTTTATCAAATGGCTCTGCTCCAATGGCTGCAGGAAAGCTATAGGCCATTCTTGTTCTTTGTATTCATTTTCATAGCTCTATTGCTGAGATTTCTCTTAATAGAAAAGTCAAGAAAGAGAACATCCACTCTCCCTCCAAGTCCTCCTATCCTACCCATCATTGGCAATCTCCACCAACTTGGCACCTCACCCCACCTATCTCTGCAAAGCCTTGCAGACAAATATGGACCCATAATTTTTCTTCAACTTGGTGAAATCCCAACCGTGGTTGTTTCATCAGCTAGATTGGCAAAGGAAGTGTTGAAAACCCATGATCTTGCACTTTCAAGCCGTCCACAACTGTTTTCAGCTAAATACCTCTTTTACAACTGCACAGATATTGCCTTTTCTCCTTATGGAGCTTACTGGAGGCATATCAGAAAAATTTGCATACTTGAGCTTCTTAGTGCCAAAAGGGTACATTCATCAAGTTTTGTTAGAGAAGAAGAAGTAGCTCGTTTAATTAATCGAGTTGCAGGGTCTTATCCAGGAACTGTCAATTTGTCCAAGATGCTGGGACTGTATGCAAATACTGTCCTTTGCCGTGTTGCATTTGGAAGGGACTTCACAGAAGGAGAGAATCAAAGACATGGGTTCCAACAGATGCTTGATGAGTACCAAGAACTCCTTGGAGGATTCAGTGTTGGTGACTTTTTTCCTTCCTTAGAGTTCATACACAGCTTGACGGGTATGAAGTCAAGACTCCAGAACACTTCTCGAAAATTTGATCAACTCTTTGATCAGATACTGAATGAACACCAGGGTTCCAACAAGAGAGAGGAGCAAAAGGACCTTGTAGATGTTTTACTTGAGGTGCAGAAGGATAGCTCTGGTGAGATGCCTCTCACCACTGATAATATCAAGGCTATCATCTTGGACATGTTTGCTGCAGGAACTGACACAACTTTCATTACTCTTGATTGGGCAATGACTGAGCTGCTAATGAATCCCCATGTTATGGAAAAAGCACAAAAGGAAGTGCGGAGCATCATGGGAGAAAGAAGAGTAGTTGCAGAGAGTGATCTGCATCAACTGCAGTATATGAGGGCTATAATCAAAGAGGTATTTCGGTTGCATCCTGCAGTTCCAGTACTAGTCCCAAGAGAATCCATGGAAGATATTATCATAGATGGGTATAAAATTCCAGCTAAAACAAGAATTTTTGTGAATGCTTGGGCAGTGGGTAGGAACCCAGAAAGTTGGGAAGATCCCAATGCATTTAAACCAGATAGATTTTTAGAGAGTGATATTGACTACAAGGGACAGGATTTTGAGCTTATACCATTTGGGGCAGGTAGAAGAGGTTGTCCAGCTATTACATTTGCCATTGCTGTTGTTGAGCTTGCTCTAGCTCAACTCCTCCACAGTTTTGATTGGGAGCTTCCTTCTGGTGTTACAGCCAAAGACTTGGACCTCACTGAAGTTTTTGGTATCTCAATGCACAGGAGAGAAAATTTTCAAGTTGTTGCTAAGCCTTACTTTCCATGA 1614 0.4188 MIAAEVSYIWLKRETLAAHIALCKLHFSSVYQMALLQWLQESYRPFLFFVFIFIALLLRFLLIEKSRKRTSTLPPSPPILPIIGNLHQLGTSPHLSLQSLADKYGPIIFLQLGEIPTVVVSSARLAKEVLKTHDLALSSRPQLFSAKYLFYNCTDIAFSPYGAYWRHIRKICILELLSAKRVHSSSFVREEEVARLINRVAGSYPGTVNLSKMLGLYANTVLCRVAFGRDFTEGENQRHGFQQMLDEYQELLGGFSVGDFFPSLEFIHSLTGMKSRLQNTSRKFDQLFDQILNEHQGSNKREEQKDLVDVLLEVQKDSSGEMPLTTDNIKAIILDMFAAGTDTTFITLDWAMTELLMNPHVMEKAQKEVRSIMGERRVVAESDLHQLQYMRAIIKEVFRLHPAVPVLVPRESMEDIIIDGYKIPAKTRIFVNAWAVGRNPESWEDPNAFKPDRFLESDIDYKGQDFELIPFGAGRRGCPAITFAIAVVELALAQLLHSFDWELPSGVTAKDLDLTEVFGISMHRRENFQVVAKPYFP. 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02839 537 FunFam Cytochrome P450 99A2 63 533 - -
Seca3g02839 537 CDD CYP71-like 103 527 - -
Seca3g02839 537 SUPERFAMILY Cytochrome P450 74 534 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g02839 537 Pfam Cytochrome P450 74 524 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g02839 537 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 471 480 IPR017972 GO:0005506|GO:0016705
Seca3g02839 537 PRINTS E-class P450 group I signature 478 501 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g02839 537 PRINTS E-class P450 group I signature 101 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g02839 537 PRINTS E-class P450 group I signature 125 146 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g02839 537 PRINTS E-class P450 group I signature 217 235 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g02839 537 PRINTS E-class P450 group I signature 432 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g02839 537 PRINTS E-class P450 group I signature 328 345 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g02839 537 PRINTS E-class P450 group I signature 468 478 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g02839 537 PRINTS E-class P450 group I signature 348 374 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g02839 537 PRINTS E-class P450 group I signature 391 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g02839 537 Gene3D Cytochrome P450 60 535 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g02839 537 PANTHER CYTOCHROME P450 71B11-RELATED 56 532 - -
Seca3g02839 537 PRINTS P450 superfamily signature 392 403 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g02839 537 PRINTS P450 superfamily signature 469 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g02839 537 PRINTS P450 superfamily signature 339 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02839 Seca-Chr3 50876434 50878734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02839 45 531 Cytochrome P450 AT3G26310 44.309 1.78e-153 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02839 - - lang:109326078 810.061