Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02838 ATGGAAGCACTATCCCTTCCCATAAACACTCTCACTCTCTCCAATTCTAATTCCAACTACATTTCTCTGAGTGCTTCTTCTAATTATGCCTCACTCTCTTCCTTACAACTCTCTTCTTCTTCCACAACCACACCCCTCCTCACTTTGAAGAGTGTCGTTAGAGTGCAAGCTGAGAGTGAGGATTATGAATTGAAGCAAATGAGGGACATGGCTGCTGCCAGAAAGAGATGGGAAGCTCTGATCAGGGATGGAAAAGTTAAAGTTCTCACCCCAAGGGAAGCTGGGTATGCAGTTCAGCTTTCAAATAAGCCCCTTCTTGATGTTCGCCCCTCAAATGAGCATAACAAGGCATGGGTGAGAGCTGCAACCTGGATTCCAATATTTGATGTTGATAATGGACTAGATGTTGGAACCATTCCCAGAAAAATCACAAATTTCGTTATGGGAGGTTGGTGGAGTGGCATGCCTACACTGTCATATGATAGCCAGTTCTTAGCCAAAGTGGAGGAGAAGTTCCCCAAAGACAAAGAATTAATTGTTGCATGCCAGAAGGGACTGAGATCACTAGCTGCTTGTGAGCTACTGTATAATGCTGGCTATGAAAATTTGTTCTGGGTTCAAGGAGGCTTAGAGGCTGCTGAAGAAGAGGATCTTGTTGTAGAGGGTCCAGTGCCTCTTAAGTTTGCTGGAATTGGTGGTGTTTCAGAATTCCTTGGTTGGACTGATCAACAAAGAGCTGCTGCAGCCAAGGAAGGTTGGGGATATAGATTAGTGTTTTCTGCACGCTTGGTAATCTATCTATTGTATGTTTTAAGTTGTAATTTTATTTCTTAA 834 0.4329 MEALSLPINTLTLSNSNSNYISLSASSNYASLSSLQLSSSSTTTPLLTLKSVVRVQAESEDYELKQMRDMAAARKRWEALIRDGKVKVLTPREAGYAVQLSNKPLLDVRPSNEHNKAWVRAATWIPIFDVDNGLDVGTIPRKITNFVMGGWWSGMPTLSYDSQFLAKVEEKFPKDKELIVACQKGLRSLAACELLYNAGYENLFWVQGGLEAAEEEDLVVEGPVPLKFAGIGGVSEFLGWTDQQRAAAAKEGWGYRLVFSARLVIYLLYVLSCNFIS. 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02838 277 Pfam Rhodanese-like domain 95 212 IPR001763 -
Seca3g02838 277 ProSiteProfiles Rhodanese domain profile. 99 222 IPR001763 -
Seca3g02838 277 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 11, CHLOROPLASTIC 1 269 IPR044664 -
Seca3g02838 277 CDD RHOD 105 212 - -
Seca3g02838 277 Gene3D - 86 255 IPR036873 -
Seca3g02838 277 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 84 221 IPR036873 -
Seca3g02838 277 SMART rhod_4 89 219 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02838 Seca-Chr3 50872406 50876217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02838 1 268 Sulfurtransferasese or Rhodanese AT4G24750 67.897 4.90e-131 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02838 - - gmx:100791331 412.149