Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02809 ATGGACAAATACGGAATGCACCTTCTTGCATTGTCGCACGCGTATTCGGTGACTCAACTGAAGCAGAGGTGCATCAAGGGACTGGCCCAACGCGTGACCACAGAGAACGTGGTGGACTTGTTGCAACTGGCGAGGCTCTGCGATGCACCGGATCTTTACCTCAATTGCGTGAAGCTACTAACCAATAATTTCAAATCCGCGGCGCAAACAGAGGGATGGAAATTCTTGCACAAGCATGACCCCTGCCTCGAGCTCGACATTCTTCGAGCCATGAACGAACACAAATCGAGGAAGAAGAAAGCGAGGAGGCGAAGAGAGGAGCAGAGATTGTATATGCAGCTGAGCGAAGCGATGGAATGTTTGGAACACATATGCACAGAAGGGTGCACACACGTGGGGCCATTCGATGTGGAGCTTAAACAACAGAAGAGGCCATGCTCTAAGTTCTCCACGTGTCAAGGTTTGCAGGTGTTGATCCTACATTTCGCCACGTGTAAGAGGAGGCTTAACGCAGGGTGCTTGAGGTGTAAGCGCATGTGGCAGCTCTTCAGACTACACTCCTCCATTTGTCTACACCATGATTCCTGCAAGGTCCCTCTTTGCAGACAAATTCAAATGAAAATGCAGCAAGAGAACAGGGAAGATGATGCAAGGTGGAAGCTACTAGTAAGGAAGGTGGCCTCGGCCAAAGCCATGTCTTCCTTGTCACTGTCAAAGATTACATTAGAGGGACCACAAAACAATCCTGCGATCAGAAGTTTCGTATTACAATGA 774 0.491 MDKYGMHLLALSHAYSVTQLKQRCIKGLAQRVTTENVVDLLQLARLCDAPDLYLNCVKLLTNNFKSAAQTEGWKFLHKHDPCLELDILRAMNEHKSRKKKARRRREEQRLYMQLSEAMECLEHICTEGCTHVGPFDVELKQQKRPCSKFSTCQGLQVLILHFATCKRRLNAGCLRCKRMWQLFRLHSSICLHHDSCKVPLCRQIQMKMQQENREDDARWKLLVRKVASAKAMSSLSLSKITLEGPQNNPAIRSFVLQ. 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02809 257 SMART TAZ_2 108 202 IPR000197 -
Seca3g02809 257 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 1 241 IPR044513 -
Seca3g02809 257 FunFam BTB/POZ and TAZ domain-containing protein 2 33 103 - -
Seca3g02809 257 FunFam BTB/POZ and TAZ domain-containing protein 2 104 230 - -
Seca3g02809 257 Gene3D TAZ domain 105 229 IPR035898 -
Seca3g02809 257 SUPERFAMILY TAZ domain 106 206 IPR035898 -
Seca3g02809 257 Gene3D - 31 104 - -
Seca3g02809 257 Pfam TAZ zinc finger 115 201 IPR000197 -
Seca3g02809 257 CDD BACK 33 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02809 Seca-Chr3 50554103 50556949 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Seca3g02809 zf-TAZ 1.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02809 - - gmx:100813611 374.785