Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02788 ATGTATAGCGTCTGGATTGGAGGATCAATTGCAGCACCCCTCAACACCTTCCAGCAGATGTGGATATCTAAGGGTGAAGAATTATGTGGATATCTACGAGGATTGAGATGGTGGCCAGGACAGGATATGGAAAGGTTTTCAAGAACTGTCATTGGACGGTTCATTGTGTTCATGACTGGGCGAGAAGCATGTAAGATATTGTTAATTGAGAAGGATAGGATTGTGAGTTTGAATTTGTTTTATACTGACCAACAAGTTCTACGCCCTACCGGATTGCTGCAGACCATTGTAGAAGCACACAAAAGGCCAATAAGGCTTATTGTTGAACACTTGTCAATGAAACAGAGCGATTATTGA 357 0.4202 MYSVWIGGSIAAPLNTFQQMWISKGEELCGYLRGLRWWPGQDMERFSRTVIGRFIVFMTGREACKILLIEKDRIVSLNLFYTDQQVLRPTGLLQTIVEAHKRPIRLIVEHLSMKQSDY. 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02788 118 Gene3D - 2 11 - -
Seca3g02788 118 Gene3D - 12 26 - -
Seca3g02788 118 SUPERFAMILY Actin-like ATPase domain 1 26 IPR043129 -
Seca3g02788 118 Pfam Actin 2 26 IPR004000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02788 Seca-Chr3 50217019 50222228 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02788 2 26 Cytoskeleton Gene Families AT1G49240 84.000 6.44e-08 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02788 - - gmx:100810666 87.4261