Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02771 ATGTCATTCAAATCTGTGGAGGAATTCAAAGATATTTACAGAAAATATGCTTTTCAACAAGTGTTTGGTTTTGTAATAAGAACCTCGAGAAAGAACTCCTCTGGTTGTGTTTGTAAACTTGTACTAGCATGTGCACGCCAAGGAACCGTACATCAACTATGCAAAACTATTTCAAAACTGTCATCAATCAAAGCTCAATGTGGAGCATATGTTACTACTTGTTTGAAGTCTGATGGTTTGTATTGCATAACCAAGGTCTTTCTTGATCATTCTCATGAGCTAAGCCCAAGCAAAGCAAGATTATTCAGGTCAAACAAAGATATCAGCATGCATGTGAAGGGGGTCTTAGATGTCAACGATAGGGCGAGGGTGAGATTGAACAAAAGCTTTCATTTCATTGTTACAGATGTCGGGGGCTATGAAAAGTTGCCCTGTATTGAGAGAGATGCGAGGAATTATATTATAAAGGAAAGGCGAGCAATTGGCAAAGGTGGTGATGGTGAGGCTCTCAAGGGTTGTTTTGCTAGGATGCGAGAGCAAAATAGTGACTTTTTCTATGACATTGATTTGGATAATGATTTTCATATTCGAAATGTGTTTTGGGCAGATGCAAGAAGTATGTCAGCATATGTATCATCTGGTGATGTCATTACATTTGATACAACTTATCTTGCAAATAAGTATGATATGCCATTTGTTGCATTTGTTGGGGTTAATCATCATGGTCAATCAGTACTACTTGGATGTGGGTTGCAATGGCCAAAAATCATAAACTAA 777 0.3784 MSFKSVEEFKDIYRKYAFQQVFGFVIRTSRKNSSGCVCKLVLACARQGTVHQLCKTISKLSSIKAQCGAYVTTCLKSDGLYCITKVFLDHSHELSPSKARLFRSNKDISMHVKGVLDVNDRARVRLNKSFHFIVTDVGGYEKLPCIERDARNYIIKERRAIGKGGDGEALKGCFARMREQNSDFFYDIDLDNDFHIRNVFWADARSMSAYVSSGDVITFDTTYLANKYDMPFVAFVGVNHHGQSVLLGCGLQWPKIIN. 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02771 258 Pfam FAR1 DNA-binding domain 12 95 IPR004330 -
Seca3g02771 258 Pfam MULE transposase domain 216 251 IPR018289 -
Seca3g02771 258 PANTHER OS01G0519700 PROTEIN 1 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02771 Seca-Chr3 49997781 49998557 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g02771 FAR1 3e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02771 - - psat:127087122 297.745