Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02753 ATGTGTCTGGTTGAGAAGGCAACAGCCACTCAACTAAGTTTCAAGCTTTTTTCCATTCCCAACTCTTCACTTATGGCCAACACACAGTCACAACCTTACAACACCATCGACCCAAACAGCGGTTTCTGTTCCCAATCCAGAACCTTCCACAGTCTCCGTCCAAACGTCCCTCTCCCTCCGCCATCTCACCCTCTCTCCTTCGCCGATTACATCCTTTCTCTCCTCCCCACCACCGCCACCTCCTCCTCCACCGCCGCCCTCATAGACTCCGCCACTGACCGCCACCTCTCTTACTCCCTTCTCCTCCGCCAAATCAAATCCCTCACTTACTCCCTCCAATCCCTCACCCCTCTCTCCAATGGCCACGTGGCATTCATTCTCGCCCCTACTTCCCTACACGTCCCCGTACTCTATCTATCCCTTCTCTCCCTCGGAGTCACCATCTCACCCGCTAACCCACTCAGTTCTCCCTCCGAGGTGACTCACCAGGTTCGACTCACCAAACCCGTCATCGCATTCGCCACCTCCTCCACCGCTGCCAACATTCCCAACCTCCCATTCGGCACTATCCTCCTCGATTCCCCCTCCTTCCTTTCCATGCTCGATGCCGAGGTTCACTCAGAGCCGCGCCGAGTTCAAACGAGTCAATCTGACTCAGCGGCGATTCTCTTCTCTTCAGGCACAACAGGGCGAGTCAAGGGCGTGGACCTGACCCACGGGAACCTAATCGCGTTGATTGGGGGGTTTTATCACCTGAGGCACATGATGGAACAGGAGGAAGAAGAACCGGACCCGGTGTCGCTGTTCACTCTGCCGCTTTTCCACGTGTTTGGGTTCTTCATGCTGGTTAGGGCCATAGCCATGGAGGAGACGTTGGTGCTGATGCAGAGGTTCGATTTTGAAGGGATGCTGAAGGCCGTGGAGAGGTACAGGATCACCTACATGCCGGTATCGCCGCCGCTGGTGGTGGCGCTCGCTAAGTCGGAGTTGGTGAAGAAATACGATCTTAGCTCGCTCCGGTTGCTGGGATGCGGTGGCGCGCCGCTCGGTAGGGACGTGGCGGAGAACTTCAAAGCTAAATTCCCCAACGTGGAAATTGTGCAGGGCTATGGTCTGACTGAAAGTGGAGGAGGGGCTGCAAGAATGATAGGGCCCGATGAAGCTACGCGCCATGGTTCAGTGGGTCGACTAGCAGAAAATATGGAAGCCAAGATAGTGGACCCTGTAACTGGTGAGGCATTACCCCCTGGCCAGAAAGGGGAGCTGTGGTTGCGAGGTCCAACAATCATGAAAGGGTGTGGTCACTGTGGTGGTTATGGTGGCAGTGCAGGTTATGTAGGAGATGATAAGGCAACTGCTGAAACATTGGATTCAGAGGGGTGGCTGAAGACTGGTGATCTTTGTTATTTTGACTCTGATGGTTTCCTATTCATTGTAGATAGGCTGAAGGAATTGATCAAATACAAAGCTTATCAGGTTCCCCCAGCTGAATTGGAACACATACTTCACACCAATCCTGAAATTGCTGATGCTGCAGTAGTTCCGTATCCTGATGAAGATGCAGGGCAAATTCCAATGGCCTTTGTGGTAAGAAAGCCTGGAAGCAACATCACTGCAGCTCAGGTCATGGAGTTTGTGGCAAAGCAGGTTGCACCATACAAGAAGATACGACGTGTTTCTTTTATTAACTCTATCCCAAAATCTCCGGCTGGCAAAATTTTGAGAAGAGAATTAGTTGATTATGCTCTGTCTAGTGGTTCATCTAAATTGTGA 1773 0.5228 MCLVEKATATQLSFKLFSIPNSSLMANTQSQPYNTIDPNSGFCSQSRTFHSLRPNVPLPPPSHPLSFADYILSLLPTTATSSSTAALIDSATDRHLSYSLLLRQIKSLTYSLQSLTPLSNGHVAFILAPTSLHVPVLYLSLLSLGVTISPANPLSSPSEVTHQVRLTKPVIAFATSSTAANIPNLPFGTILLDSPSFLSMLDAEVHSEPRRVQTSQSDSAAILFSSGTTGRVKGVDLTHGNLIALIGGFYHLRHMMEQEEEEPDPVSLFTLPLFHVFGFFMLVRAIAMEETLVLMQRFDFEGMLKAVERYRITYMPVSPPLVVALAKSELVKKYDLSSLRLLGCGGAPLGRDVAENFKAKFPNVEIVQGYGLTESGGGAARMIGPDEATRHGSVGRLAENMEAKIVDPVTGEALPPGQKGELWLRGPTIMKGCGHCGGYGGSAGYVGDDKATAETLDSEGWLKTGDLCYFDSDGFLFIVDRLKELIKYKAYQVPPAELEHILHTNPEIADAAVVPYPDEDAGQIPMAFVVRKPGSNITAAQVMEFVAKQVAPYKKIRRVSFINSIPKSPAGKILRRELVDYALSSGSSKL. 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02753 590 Pfam AMP-binding enzyme 82 488 IPR000873 -
Seca3g02753 590 FunFam 4-coumarate--CoA ligase 2 484 585 - -
Seca3g02753 590 ProSitePatterns Putative AMP-binding domain signature. 222 233 IPR020845 -
Seca3g02753 590 SUPERFAMILY Acetyl-CoA synthetase-like 80 584 - -
Seca3g02753 590 CDD 4CL 87 578 - -
Seca3g02753 590 Gene3D - 484 584 IPR045851 -
Seca3g02753 590 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 42 580 - -
Seca3g02753 590 Gene3D - 55 483 IPR042099 -
Seca3g02753 590 Pfam AMP-binding enzyme C-terminal domain 497 572 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02753 Seca-Chr3 49728589 49732050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02753 28 590 Monolignol Biosynthesis Gene Families AT5G63380 61.391 0.0 697
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02753 K01904 - gmx:100777435 875.159