Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02722 ATGCTCTCCCGTGATCTCCATGTCGTCAGGTTAATGGATGTGAAACAGGGTCAGACCGTGCTCTACTTGGTCTTTGAGTACATGGATGCCGATCTCAAGAAATACATTCGTAGTTTCCGCCAAACCGGAGAAAACATCCCACCCAAAACTATCAAAAGCTTGATGTATCAACTTTGCAAGGGTGTTGCATTCTGCCACGGCCATGGAATCTTGCACAGGGACTTGAAGCCTCACAATCTCTTGATGGACTGA 252 0.4683 MLSRDLHVVRLMDVKQGQTVLYLVFEYMDADLKKYIRSFRQTGENIPPKTIKSLMYQLCKGVAFCHGHGILHRDLKPHNLLMD. 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02722 83 ProSiteProfiles Protein kinase domain profile. 1 83 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g02722 83 SUPERFAMILY Protein kinase-like (PK-like) 5 83 IPR011009 -
Seca3g02722 83 ProSitePatterns Serine/Threonine protein kinases active-site signature. 70 82 IPR008271 GO:0004672|GO:0006468
Seca3g02722 83 PANTHER CELL DIVISION PROTEIN KINASE 7 83 - -
Seca3g02722 83 Pfam Protein kinase domain 7 83 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g02722 83 Gene3D Transferase(Phosphotransferase) domain 1 4 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02722 Seca-Chr3 49264895 49266038 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02722 1 83 Core Cell Cycle Gene Families AT1G76540 81.818 6.00e-48 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-Pl Seca3g02722 Pkinase 9.4e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02722 K07760 - vvi:100254782 159.073