Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02714 ATGGATGCTGTTTCGAAGGGTAATAATGCAGGAGATGCGGAAAATATATCCGTGCAGGCTTTGGATGACATGTCTAATTATGGGGATAATGATAAAGCAAATTATGAGAATGAAAGTGACGAAAGTGAATCCGGAGAAGAATATTCAAGCACAGATGAAGACGAAGCAAGTGCAGGGAATGGTGATGATGGTATGACTATTGATGGCATACATGACTTTCCCAATGTTAATTGGAAAAGTCTTAGCTTGGAGGAGTTTATGAAATATCATTTTGTGGATCGTGAGGTTGCTTTTATGTTCTATAATTGGTTTGCAAGAAGGAGGGGGTTTTCTGCGCGAAAGTGCAACGTTGGAAAGACAAAGAATGAAGTAGTTGTGCGACAAACTTTTGTTTGCTTTAGAAATGGAACTAATAAGGGCAAGAAGGAAGGTTATAAAAGGGAACCTAAACGAATTGTAAGATGCGAATGTAAAGCCCGTTGCAGGGTTCGTTGCAATGCAGAAAATAGTCGTTGGTATGTGACTGCATTAGTTGATGAGCATAACCATCCGATGTTGGAAGAGAGGTTCCATGGCATGCTTCCGTCTCATAGGAGAATGGACGAGGACGAAATACAGATGATGAATCATTTGAGAGATGTTGGGATTAGCGCACCTAGCATTTATCAGGCTTTTTCTAGTCAGTCCGGTGGGTTTGAGAATGTTGGCTTTAGAACACGTGATATGTATAATGAGATAGGAAAGCAAAGGAGGTTGAAAAAAAAATGA 768 0.401 MDAVSKGNNAGDAENISVQALDDMSNYGDNDKANYENESDESESGEEYSSTDEDEASAGNGDDGMTIDGIHDFPNVNWKSLSLEEFMKYHFVDREVAFMFYNWFARRRGFSARKCNVGKTKNEVVVRQTFVCFRNGTNKGKKEGYKREPKRIVRCECKARCRVRCNAENSRWYVTALVDEHNHPMLEERFHGMLPSHRRMDEDEIQMMNHLRDVGISAPSIYQAFSSQSGGFENVGFRTRDMYNEIGKQRRLKKK. 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02714 255 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 5 248 - -
Seca3g02714 255 MobiDBLite consensus disorder prediction 1 66 - -
Seca3g02714 255 MobiDBLite consensus disorder prediction 10 24 - -
Seca3g02714 255 MobiDBLite consensus disorder prediction 40 59 - -
Seca3g02714 255 Pfam FAR1 DNA-binding domain 100 186 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02714 Seca-Chr3 49058529 49060114 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g02714 FAR1 2.8e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02714 - - mtr:112417123 187.963