Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02695 ATGGATAAGCTATGCTGTTTCAAGTCTTCCTACTCTCAGCTTGTAGCTGCACGTTCTTCATCCAGCACTGGTAAGGGAAAAAATCAAGAAGGCTCAATAAAGTATGGTTTCAGCCTAGTAAAAGGAAGAGCTAATCATCCAATGGAGGATTATCATGTTGCCAAGTTTGTGCAGATACAGGAGAAAGAATTGGGTTTATTTGCTATTTATGATGGTCATTTGGGTGACCGTGTACCTGCCTACTTACAGAAACATTTGTTTACCAACATTCTAAGGGAGGAGGAATTTTGGAATGACCCCACTCTTTCTATCTCAAAAGCATATGAGAGCACAGATCAAGCAATTCTGTCACACAGTTCTGATTTGGGGCATGGTGGATCAACAGCAGTAACTGCAATATTGATCAATGGGCGAAGGTTATGGATAGCAAATGTTGGAGACTCACGAGCTGTTCTTTCAAGAAAAGGTCAAGCAGTACAAATGACTACAGATCATGAACCAAGCACAGAACGAGGCAGCATTGAGAATAGAGGTGGTTTTGTCTCCAACTTACCAGGTGATGTGCCTAGAGTAAATGGACAACTTGCGGTTTCTCGTGCATTTGGAGACAAGAGTCTCAAGTCACATTTGAGATCAGACCCTGATGTTCAGCATGCTGACATAGATGCTGATATTGATATTCTAATCCTTGCAAGTGATGGACTCTGGAAGGTAATGGCTAATCAAGAGGCAGTGGATATTGCTAGAAGAATGAGAGACCCACAGAAAGCAGCTAAGCAGCTAACAGCTGAAGCATTAAAAAGAGACAGTAAAGATGATATATCTTGTGTTGTGGTTAAATTCAGGTGA 849 0.4146 MDKLCCFKSSYSQLVAARSSSSTGKGKNQEGSIKYGFSLVKGRANHPMEDYHVAKFVQIQEKELGLFAIYDGHLGDRVPAYLQKHLFTNILREEEFWNDPTLSISKAYESTDQAILSHSSDLGHGGSTAVTAILINGRRLWIANVGDSRAVLSRKGQAVQMTTDHEPSTERGSIENRGGFVSNLPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDVQHADIDADIDILILASDGLWKVMANQEAVDIARRMRDPQKAAKQLTAEALKRDSKDDISCVVVKFR. 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02695 282 Gene3D - 29 282 IPR036457 -
Seca3g02695 282 SMART PP2C_4 30 279 IPR001932 -
Seca3g02695 282 SMART PP2C_SIG_2 45 281 IPR001932 -
Seca3g02695 282 PANTHER PROTEIN PHOSPHATASE 27 281 IPR015655 GO:0004722|GO:0006470
Seca3g02695 282 MobiDBLite consensus disorder prediction 156 177 - -
Seca3g02695 282 CDD PP2Cc 33 281 IPR001932 -
Seca3g02695 282 SUPERFAMILY PP2C-like 32 281 IPR036457 -
Seca3g02695 282 FunFam Probable protein phosphatase 2C 39 25 282 - -
Seca3g02695 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Seca3g02695 282 Pfam Protein phosphatase 2C 43 274 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02695 Seca-Chr3 48723403 48726770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02695 1 282 PP2C-type Phosphatase Gene Family AT1G22280 73.611 1.96e-155 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02695 K17506 - gmx:100797292 508.449