Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02692 ATGCCTAACCGTAGCCTCGACCGCATACTCTTCCGGAGGAATGGGAAATTGAAGGCTGAGCCTCTTGATTGGGGGCAAAGGGTGAAAATTGTGAAAGGTCTGGCAGCTGCATTGTATTATCTGTATGAACAGTTAGAAACTCAAATCATTCATAGGGATGTTAAGACAAGCAATGTAATGCTTGATTCCCATTTCAATGCTCGCTTGGTTGACTTTGGCATGGCAAGGTGGTTAGGACATGAGCTTGAGTATAAATTGGGAGAGACATCAAGGATTGGTGGTACAATTGGGTATCTTCCCCCTGAAAGCTTGCAGAAACCAAGCAATGCTACATCCAAATATGATGTATTCAGCTTTGGCATAGTTGTGCTAGAGGTGGTATTTGGAAGGAGAGCAATAGATTTCACATACCCAGATGATCAAATCATTTTGCTTGATTGGATCAAAAGGCTTTCTGATGAAAGGAAGGTTCTAGAGGCAGCTGATACTAGGCTACAAGATGGATCCTACAAGCTTTCTGAGATGCAACATCTCATTCACATAGGTCTTGTCTGCACACTCCATAAACCACAATTGAGGCCAATCATGAAATTACCAAATCAACACATAATGTCCACCACTTAA 624 0.4215 MPNRSLDRILFRRNGKLKAEPLDWGQRVKIVKGLAAALYYLYEQLETQIIHRDVKTSNVMLDSHFNARLVDFGMARWLGHELEYKLGETSRIGGTIGYLPPESLQKPSNATSKYDVFSFGIVVLEVVFGRRAIDFTYPDDQIILLDWIKRLSDERKVLEAADTRLQDGSYKLSEMQHLIHIGLVCTLHKPQLRPIMKLPNQHIMSTT. 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02692 207 SUPERFAMILY Protein kinase-like (PK-like) 1 197 IPR011009 -
Seca3g02692 207 FunFam Receptor like protein kinase S.2 1 205 - -
Seca3g02692 207 ProSitePatterns Serine/Threonine protein kinases active-site signature. 49 61 IPR008271 GO:0004672|GO:0006468
Seca3g02692 207 Gene3D Transferase(Phosphotransferase) domain 1 1 206 - -
Seca3g02692 207 Pfam Protein kinase domain 15 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g02692 207 PANTHER - 1 197 - -
Seca3g02692 207 ProSiteProfiles Protein kinase domain profile. 1 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g02692 207 SMART serkin_6 1 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02692 Seca-Chr3 48643609 48644272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02692 1 203 Receptor kinase-like Gene Family AT5G55830 45.455 1.63e-49 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca3g02692 Pkinase 2.2e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02692 - - gmx:100796108 324.324