Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02649 ATGGATGCAAGAAGTTTGTCATCTTCACATGATCAGGCACCGTACGTCCACAAAGTGGCAGTTCCTCCAAGACAGAATCTCTTCAAGGAATTCCAAGCCACTATAAAAGAAACTTTCTTTGCTGATGATCCTCTAAGACCCTTCAAAGATCAACCTAAATCACGGAAAATCATCCTCGGAATTGAGGCCATATTCCCCATACTTAATTGGGGAAGAACTTACAACCTTAAAAAATTTAGGGGGGATATTATATCTGGTCTCACTATTGCAAGCCTTTGCATTCCTCAGGATATTGGATACGCCAAGCTTGCACATTTGGCTCCACAGTATGGACTGTGTAAGACTCTTTTGTCTCTCATCAACAGCTCTAGTTACCTATACTCCAGCTTTGTTCCACCACTGATTTATGCTGCCATGGGTAGTTCTCGTGATATTGCAATAGGACCAGTGGCAGTGGTCTCTCTCTTGTTGGGGACTTTACTTAGTAATGAGATTGATCCTGTTACACATGCAGCAGAATATCGGCGACTTGCTTTTACAGCCACTTTTTTTGCTGGGATTACCCAAGCAACACTTGGGATTTTTAGGTTAGGATTCTTGATTGACTTCCTATCCCATGCTGCTATTGTCGGTTTTATGGGGGGTGCTGCCATCACAATTGCTCTTCAACAGCTTAAGGGTTTCCTTGGTATTAAAAGTAAAATGTTCACCACGAAAACTGATATTGTCTCTGTGATGCATTCAGTATTCTCATCAGCACATCATGGAATTGTAAACTGTTTTCTTATTATTTCTTGTCATGTGGATCAGGGAAAGAAGAACAAGAAATTCTTCTGGGTGCCAGCAATTGCCCCATTGATATCTGTTGTGTTGTCCACTTTTTTTGTATTCATAACCCGTGCAGATAAGCAAGGAGTAGAAATTGTAAATCATATACAGAAAGGGATCAATCCTTCATCCGTTAAAAAAATTTATTTTAGTGGTGAATACCTTGGGAAAGGTTTTAGAATTGGCGTCCTGGCAGGCATGATAGCATTGACTGTGAGTAAATTTGACACTCTAATTAAACCATTAAATTTTGGTTCTCAGGAAGCAATAGCAATTGGAAGAACATTTGCATCAATGAAGGACTATCAACTGGATGGAAACAAAGAAATGGTAGCATTAGGAACAATGAATATTGTTGGTTCAATGACTTCCTGTTATGTGGCAACTGGTTCTTTCTCTCGGTCTGCGGTAAATTTCATGGCGGGCTGCCAAACTGCGGTCTCTAATATTGTGATGTCAATAGTTGTGTTCTTAACCCTGCAATTCATCACTCCTCTTTTTAAGTACACTCCAAATGCCATTCTTTCTGCCATCATTATTTCTGCTGTCATCAACCTTGTGGACTATCAGGCAGCAATTTTGATTTGGAAGATTGATAAATTTGATTTTGTGGCTTGCATGGGAGCATTCTTCGGGGTTGTTTTTGTCTCAGTTGAGATAGGACTTCTAATTGCTGTCTCCATATCCTTTGCAAAGATCTTACTACAAGTCACAAGGCCCAGAACTGCTATTCTGGGCAGGATTCCTAGGACTTCTGTCTATAGAAACATTCAACAATACCCAGAAGCTAGTAAGGTTTCCGGTGTACTGATTGTAAGAGTGGATTCTGCAATATATTTTTCCAACTCCAATTATGTTAAAGAAAGGATATTAAGATGGTTGATAGATGAAGAAGAACAAGTGATAGGAGACTACCACACAAAAATCCAGTTTTTGATAGTTGAAATGTCACCGGTTACTGACATTGACACCAGTGGCATCCATGCCTTTGAAGAGTTACACAGAAGTCTTGCAAAGAAAGGTGTTGAGCTTGTTCTGGCAAATCCTGGCCCTGTAGTGACGAACAAGCTTTACACGTCCAATTTTGCAAACACGATCGGTGAGGACAAGATCTTCCTCACTGTTGCAGAGGCTATTGCGTACTGTTCTCCAAAGCTAGCTGAGGACCCATGA 2001 0.4048 MDARSLSSSHDQAPYVHKVAVPPRQNLFKEFQATIKETFFADDPLRPFKDQPKSRKIILGIEAIFPILNWGRTYNLKKFRGDIISGLTIASLCIPQDIGYAKLAHLAPQYGLCKTLLSLINSSSYLYSSFVPPLIYAAMGSSRDIAIGPVAVVSLLLGTLLSNEIDPVTHAAEYRRLAFTATFFAGITQATLGIFRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIKSKMFTTKTDIVSVMHSVFSSAHHGIVNCFLIISCHVDQGKKNKKFFWVPAIAPLISVVLSTFFVFITRADKQGVEIVNHIQKGINPSSVKKIYFSGEYLGKGFRIGVLAGMIALTVSKFDTLIKPLNFGSQEAIAIGRTFASMKDYQLDGNKEMVALGTMNIVGSMTSCYVATGSFSRSAVNFMAGCQTAVSNIVMSIVVFLTLQFITPLFKYTPNAILSAIIISAVINLVDYQAAILIWKIDKFDFVACMGAFFGVVFVSVEIGLLIAVSISFAKILLQVTRPRTAILGRIPRTSVYRNIQQYPEASKVSGVLIVRVDSAIYFSNSNYVKERILRWLIDEEEQVIGDYHTKIQFLIVEMSPVTDIDTSGIHAFEELHRSLAKKGVELVLANPGPVVTNKLYTSNFANTIGEDKIFLTVAEAIAYCSPKLAEDP. 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02649 666 PANTHER SULFATE TRANSPORTER 25 659 IPR001902 GO:0016020|GO:0055085
Seca3g02649 666 Pfam STAS domain 536 654 IPR002645 -
Seca3g02649 666 SUPERFAMILY SpoIIaa-like 537 659 IPR036513 -
Seca3g02649 666 Gene3D STAS domain 515 662 IPR036513 -
Seca3g02649 666 ProSiteProfiles STAS domain profile. 535 658 IPR002645 -
Seca3g02649 666 FunFam Sulfate transporter 31 515 661 - -
Seca3g02649 666 Pfam Sulfate permease family 79 483 IPR011547 GO:0016020
Seca3g02649 666 CDD STAS_SulP_like_sulfate_transporter 536 651 - -
Seca3g02649 666 NCBIfam sulfate permease 66 654 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02649 Seca-Chr3 47971615 47976125 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02649 8 665 Inorganic Solute Cotransporters AT1G22150 71.642 0.0 920
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02649 K17470 - gmx:100804208 1050.81