Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02648 ATGGCCATAAGCACTCCAGGCATCTTGGTGATTCGCATAAGCTCTGGGTCACTCTGCTTTGCCAATGCTAATGTTGTCAGAGAAAGAATACTTAAGTGGGTCACGGATGAAGGAGATGATAATAAAGAAACTGCCAAGGGAAAGGTCCAAGCAATAATCTTGGACATGACCAACCTGATGAATGTTGATACTTCCGGAATTATAGCACTGGAGGAACTTCACAAGAGGTTGCTTTCACATGGTGTACAATTGGCTATGGTCAACCCAAGGTGGTTAGTAATTCACAAGCTTAAACTTGCAAACTTTGTGGATAAAATGGGAAATGAATGGGTTTTCCTAACTGTTGCTGAAGCTGTGGATGCATGTCTGTCTACTAAATTCGCTGAGCCATGA 393 0.4249 MAISTPGILVIRISSGSLCFANANVVRERILKWVTDEGDDNKETAKGKVQAIILDMTNLMNVDTSGIIALEELHKRLLSHGVQLAMVNPRWLVIHKLKLANFVDKMGNEWVFLTVAEAVDACLSTKFAEP. 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02648 130 PANTHER SULFATE TRANSPORTER 6 123 IPR001902 GO:0016020|GO:0055085
Seca3g02648 130 CDD STAS_SulP_like_sulfate_transporter 2 115 - -
Seca3g02648 130 Gene3D STAS domain 1 127 IPR036513 -
Seca3g02648 130 SUPERFAMILY SpoIIaa-like 5 122 IPR036513 -
Seca3g02648 130 ProSiteProfiles STAS domain profile. 15 122 IPR002645 -
Seca3g02648 130 Pfam STAS domain 4 118 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02648 Seca-Chr3 47922222 47922883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02648 1 126 Inorganic Solute Cotransporters AT5G10180 51.562 5.11e-39 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02648 K17469 - gmx:100776591 221.09