Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02621 ATGGTCTTTGCTCAGGTGGGCTATGCCATTGTAAATTTTATTTGTGAAGCCTCCTTTAATCATGGGATGAGTCCTTATGTGTATATAACCTATCGACATGTTGTAGCTGGGGTTGTACTGCTCCCTTTTCCATACTTTCTGGAGAGAAAAGTAAGGCCAAAGCTGACATTTGCTCTTTTTGTGGAAATTTTTGTGCTTTCACTGTTAGGGGTCAGTTTGGTTCTTAATTTATACTTTGCAAGCCTGAAGTACACATCTCCAACCTTTGTTGTTGCCATGGTCAACACAGTATCTTCCCTTACCTTCATTTTTTCTTCTTTCTATATGTTTACACGTGTAATCAATTGTAATCATTCTTATTCTAATTTGGCTTTGGATTGTTTGTAA 387 0.3721 MVFAQVGYAIVNFICEASFNHGMSPYVYITYRHVVAGVVLLPFPYFLERKVRPKLTFALFVEIFVLSLLGVSLVLNLYFASLKYTSPTFVVAMVNTVSSLTFIFSSFYMFTRVINCNHSYSNLALDCL. 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02621 128 PANTHER WAT1-RELATED PROTEIN 1 110 IPR030184 GO:0016020|GO:0022857
Seca3g02621 128 Pfam EamA-like transporter family 13 109 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02621 Seca-Chr3 46991903 46993879 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02621 1 105 Nodulin-like Gene Family AT5G07050 48.571 4.61e-30 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02621 - - gmx:100527877 161.77