Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g02526 ATGGCGGCTTTTACATCCATTGCTCTACAATATTCATCCACATCATCTTTACAATCCTTGGTACCTTCTCTGGAAGGTACACGTGATCATAATTCATGGTGGGTGAGAGTAAGATCAAGCAAATCCACAGCTCAAGGATTACACTCACAGAAAGCTGCAAGAGGGCTAACAATCCAGAGTGCAGCCACAAAACCAGCAAAGACGCCAGCTGAAGAAGACTGGAAGGTTAAGAGAGAACTTCTGTTGCAAAAAAGGGTAAGAAGTGTGGATGTAAAGGAAGCTCTGCGCCTTCAGAAAGAAAATAATTTTGTGATTCTCGATGTAAGGCCAGAAGCAGAGTTCAAAGAGGCTCATCCTCCAGATGCCATCAATGTACAAATATATAGGCTTATCAAAGAGTGGACAGCATGGGACATTGCCAGGCGTGCTGCATTTGCATTTTTTGGTATTTTTGCTGGCACAGAAGAGAACCCCGAGTTCATCCCAAGTACAACAAATTTACCTCATCATGCATTTCTGGAATTCATACATTTCTTTTTCTTCTGA 546 0.4231 MAAFTSIALQYSSTSSLQSLVPSLEGTRDHNSWWVRVRSSKSTAQGLHSQKAARGLTIQSAATKPAKTPAEEDWKVKRELLLQKRVRSVDVKEALRLQKENNFVILDVRPEAEFKEAHPPDAINVQIYRLIKEWTAWDIARRAAFAFFGIFAGTEENPEFIPSTTNLPHHAFLEFIHFFFF. 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g02526 181 Pfam Rhodanese-like domain 91 131 IPR001763 -
Seca3g02526 181 Gene3D - 78 175 IPR036873 -
Seca3g02526 181 ProSiteProfiles Rhodanese domain profile. 99 125 IPR001763 -
Seca3g02526 181 CDD RHOD 93 141 - -
Seca3g02526 181 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 14, CHLOROPLASTIC-RELATED 18 163 IPR043186 -
Seca3g02526 181 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 85 146 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g02526 Seca-Chr3 45459380 45463012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g02526 1 164 Sulfurtransferasese or Rhodanese AT4G27700 61.538 7.48e-63 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g02526 - - gmx:100788147 268.855